Bradyrhizobium diazoefficiens USDA 110: bll0300
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Entry
bll0300 CDS
T00109
Symbol
ragD
Name
(GenBank) RagD protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja01501
beta-Lactam resistance
bja01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
bll0300 (ragD)
01503 Cationic antimicrobial peptide (CAMP) resistance
bll0300 (ragD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bja03036
]
bll0300 (ragD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bja02000
]
bll0300 (ragD)
01504 Antimicrobial resistance genes [BR:
bja01504
]
bll0300 (ragD)
Chromosome and associated proteins [BR:
bja03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
bll0300 (ragD)
Transporters [BR:
bja02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
bll0300 (ragD)
Antimicrobial resistance genes [BR:
bja01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
bll0300 (ragD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
YqfD
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
BAC45565
UniProt:
H7C6E1
LinkDB
All DBs
Position
complement(307469..308740)
Genome browser
AA seq
423 aa
AA seq
DB search
MSDVRERSDDDEAADRPGAESLRIVELPGKVARSKRRYGGPLLGGGVLLLLAGGLGIGGW
RHYEAAREVAAVAEQVRTNVPEVRVATVQASGDLMKVTLPATTTAFEAANIFARTSGYIE
KRYVDIGDRVKKGDLLVEITAPELDQQIAQAQATLAQDQAALQQAQASRELADVTNSRDS
NLVKQGWLTAQQGDNDRLTLRAQQGAVGVAQSNIAAQEAQIRVLQQEKSYQRVVAPFDGV
VTQRNVDNGSLVQAGSTFMFTMMHSNVIRTQVFVPQDEAFGVAPGVDSDIRVPEIPGRTF
AGKVTRIATALQPGSRTLLTEIDVPNPDGLLSPGIYCTVELSIPRRTPSTTIPSDALVFD
QNGLHVAVVRNGTVHFQQVSISRDFGTTVEVRDGVQPGDQVVLNPAVNLAEGSKVTVRKS
EVS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttcgcgaacggtccgatgacgacgaggcagcagaccgccccggagcggag
agcctcaggatcgtggagctgccgggcaaggtcgcacgatccaagcgccgttacggtggt
ccgctgctcgggggaggcgtgctcctgctacttgcgggcggtctgggcatcggcggctgg
cggcactatgaggccgcgcgtgaggtcgccgcagtggcagagcaggttcggaccaacgtt
ccggaagttcgcgtggcgacggtccaggctagcggcgacctcatgaaggtcaccttgccg
gcgacgacgaccgcgttcgaggctgccaacatctttgcgcggaccagcggctatatcgag
aagcgctacgtcgacatcggcgatcgagtgaagaagggcgatctcctcgtggaaatcacc
gctcccgagctggaccagcagatcgcgcaggcgcaggcgacgctcgcgcaggaccaggcc
gcacttcagcaagcgcaagcgagccgagaactggccgacgtcaccaattcgcgcgacagc
aatctcgtcaagcagggctggttgacggcgcaacagggcgataacgatcgtcttaccctg
cgcgcacagcagggcgcggtgggcgtcgcgcagtcgaacatcgcggcgcaagaggcgcag
attcgcgtgctccagcaggagaagtcctaccagcgcgtggtggcgccgttcgacggcgtg
gtcacgcagcgcaacgtggacaatggcagcctagtgcaggccggctccaccttcatgttc
acgatgatgcattccaatgtcatccgaacccaggtcttcgtgccgcaggacgaggctttc
ggcgttgctccgggcgtcgactcggatatccgcgttcccgagattccggggcggacgttt
gcgggcaaggtcacgcggatcgcgaccgcgctgcagccggggagccggacgttgctgacc
gagatcgacgtgcccaaccccgatggcctgctcagtcccggcatctattgcacggtcgaa
ttatcgatcccgcgcaggacgccctcgacgacgatcccgtccgatgcgctcgtcttcgat
cagaacggcctccatgtcgcggtcgtgcggaatggtacggttcattttcagcaggtctcg
atctccagggatttcggcaccacggtggaagtgcgcgacggcgtgcagcccggcgatcag
gtcgtgctcaatcccgcggtcaatctggcagagggcagcaaggtcacggttcgcaagagc
gaagtgagttag
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