Bradyrhizobium diazoefficiens USDA 110: blr0689
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Entry
blr0689 CDS
T00109
Symbol
blr0689
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
blr0689 (blr0689)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr0689 (blr0689)
Enzymes [BR:
bja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
blr0689 (blr0689)
DNA repair and recombination proteins [BR:
bja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
blr0689 (blr0689)
Prokaryotic type
blr0689 (blr0689)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BAC45954
UniProt:
Q89WJ8
LinkDB
All DBs
Position
734036..734818
Genome browser
AA seq
260 aa
AA seq
DB search
MLIVPQYIPIMAKITRKPVPRKAAVPKKKAKAAVAKPKAPAKKSLKAMKPWTPAEIREVF
SRFRKANPEPKGELEHVNPFTLLVAVVLSAQATDAGVNKATRALFEVADTPQKMLDLGEE
SLREYIKTIGLYRTKAKNVIALSAKVLSEFGGEVPRTRAEIESLPGAGRKTANVVLNMAF
GEHTMAVDTHVFRVGNRTGLAPGKTPLEVELGLEKVIPAEFMLHAHHWLILHGRYTCLAR
KPRCEVCLINDLCRWPEKTV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgtccctcagtatatcccgatcatggcgaaaatcacccgcaagccggtcccg
cgcaaagcagctgtgcctaagaaaaaagcaaaggcggctgtggcgaagccgaaggccccc
gcgaagaaatcgctcaaagcgatgaaaccttggacgcccgccgagatccgcgaggtcttc
agccgtttccgcaaggccaacccggagccgaagggcgagctcgagcacgtcaatccgttc
acgctgctggtcgccgtggtgctgtcggcgcaggccaccgacgccggcgtcaacaaggcg
acgcgcgcattgttcgaggtcgccgatacgccgcagaagatgctcgacctcggcgaggag
tccttgcgcgaatacatcaagaccatcggcctctatcgcaccaaggcgaagaatgtcatt
gcgctgtcggccaaggtgctcagcgagttcggcggcgaggtgccgcgcacgcgcgccgag
atcgagtcgttgccgggcgccgggcgcaagaccgccaacgtcgtgctcaacatggccttt
ggcgaacacaccatggcggtggatacgcatgtcttccgcgtcggcaaccgcaccgggctc
gcgcccggcaagacgccgctggaagtcgagctcggtctcgaaaaggtgatcccggccgaa
ttcatgctgcatgcccatcattggctgatcctgcacggccgctatacttgcctcgcgcgc
aagccgcgctgcgaggtatgcctgatcaacgatctctgccgatggccggagaagacggtg
tga
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integrated database retrieval system
