Bradyrhizobium japonicum E109: RN69_13770
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Entry
RN69_13770 CDS
T03509
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp00300
Lysine biosynthesis
bjp00550
Peptidoglycan biosynthesis
bjp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RN69_13770
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RN69_13770
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
RN69_13770
Enzymes [BR:
bjp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RN69_13770
Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
Precursor biosynthesis
Amino acid ligase
RN69_13770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AJA61331
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Position
2923933..2925405
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AA seq
490 aa
AA seq
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MKLRDLLGQDVPGNDAAIEPAVAALDVTGVALDSRVVKSGDLFFALAGSKTDGARFIDAA
IAAGAVAIVGDHAPDGSKVPFVTVANPRRALALAAAKFFPAQPATIAAVTGTSGKTSVAA
FTRQIWERLGHASASIGTIGLVSPKRTVYGSLTTPDPIALHRQLDEIAREGVTHLAFEAS
SHGLDQYRLDGVRVSAGGFTNLSRDHMDYHPTVAHYLAAKLRLFRELVPADGAAVISADH
DCSAEAIDAARSHGLRAMAVGRNGDGAGEGIRLAAAEVEGFSQVLAVEHRGKRHAIRLPL
VGEFQIENALVSAGLAIGTGSDAANVFASLEHLEGAKGRLERVGERNGAPIFVDYAHKPD
ALAKALQALRPYAKRRLVVVFGAGGDRDAGKRPIMGEIAAENADRVIITDDNPRSERPEA
IRAEILATAKGAREIGDRAAAIRTAIEELEDGDALLVAGKGHETGQIVGSEVLPFSDHEA
VAAALASRDA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcgacctcctaggtcaggacgttccaggcaatgatgccgcaatcgagccc
gctgtcgcagcgctcgatgtgaccggcgttgcgctcgacagccgtgtggtcaagtcaggc
gacctcttcttcgcgctcgcgggcagcaagaccgacggcgcgcgcttcatcgatgccgcg
attgcagccggcgcggtggcgatcgtcggcgaccatgcgcctgatggcagcaaggtgccg
ttcgttaccgtggccaatccgcgccgcgcgctggcgctggccgcggccaaattcttcccc
gcacagcccgcgaccatcgcggcggtgaccggcaccagcggcaaaacctcggtcgccgcg
ttcacgcgccagatctgggagcggctgggccatgcctccgccagcatcggcaccatcggt
ctcgtctcgcccaagcgcaccgtctacggttcgctgacgacgccggatccgatcgcgctg
caccggcagctcgatgagatcgcgcgcgaaggcgtgacgcatctcgccttcgaggcgtcc
tcgcatgggctcgaccagtaccgcctcgacggcgtccgtgtctccgccggcggcttcacc
aatctctcgcgcgaccacatggattaccatcccaccgtcgcgcattatctcgcggcaaaa
ctccgcctgttccgcgagctggtcccggcggatggcgcggcggtgatctccgccgatcat
gattgctcggcggaggcaatcgatgctgccaggtcgcacggcctgcgcgcgatggcggtt
ggccgcaacggcgacggggcaggcgagggcattcgtcttgctgcggccgaggtcgaaggt
ttttcgcaagtgcttgccgtcgagcatcgcggcaagcgccatgcgatccggttgccgctg
gtcggcgaattccagatcgagaacgcgctggtgtcggccggacttgccatcggcaccggc
agcgatgcggccaatgtgttcgcgagcctcgagcatctcgaaggtgccaagggacgtctc
gaacgtgtcggcgagcgcaatggcgcgccgatcttcgtggactatgcgcacaagcccgat
gcgctggcgaaggcattgcaggcgctgcgtccctacgcgaagcgaaggctggtcgtcgtg
ttcggcgccggcggcgatcgcgatgccggcaagcgcccgatcatgggtgagatcgcggcc
gagaacgccgaccgtgtcatcatcaccgacgacaatccgcgcagcgagaggccggaagcc
attcgcgccgaaatcctcgcgactgcaaaaggtgcccgcgaaatcggcgaccgcgccgcg
gcgatccgcaccgcgatcgaggagttggaagacggcgatgcgctgctcgttgccggcaag
ggccacgagaccgggcagatcgtcggcagcgaggtgctgcccttcagtgatcacgaggcg
gtcgccgccgcattagcgtcgagggatgcatga
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