KEGG   Bacillus sp. JS: MY9_0738
Entry
MY9_0738          CDS       T02027                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bjs  Bacillus sp. JS
Pathway
bjs03030  DNA replication
bjs03410  Base excision repair
bjs03420  Nucleotide excision repair
bjs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bjs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MY9_0738
   03410 Base excision repair
    MY9_0738
   03420 Nucleotide excision repair
    MY9_0738
   03430 Mismatch repair
    MY9_0738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bjs03032]
    MY9_0738
   03400 DNA repair and recombination proteins [BR:bjs03400]
    MY9_0738
Enzymes [BR:bjs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MY9_0738
DNA replication proteins [BR:bjs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MY9_0738
DNA repair and recombination proteins [BR:bjs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MY9_0738
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MY9_0738
   MMR (mismatch excision repair)
    DNA ligase
     MY9_0738
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MY9_0738
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia HHH PTCB-BRCT BRCT_2 Zn_ribbon_NUD RNA_pol_A_CTD HHH_3 zf-IS66 HNOB zf-tcix Zn_ribbon_8
Other DBs
NCBI-ProteinID: AFI27277
LinkDB
Position
748678..750684
AA seq 668 aa
MDKETAKQRADELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP
TQRVGGAVLEAFQKVTHGTPMLSLGNAFNADDLRDFDRRVRQAVGDDVAYNVELKIDGLA
VSLRYEDGYFVRGATRGDGTTGEDITENLKTIRNIPLKMNRELSIEVRGEAYMPKRSFEA
LNEERIKNEEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLD
FLDELGFKTNQERKKCGDIEEVITLIDELQAKRADLPYEIDGIVIKVDSLDQQEELGFTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAILEPVKVAGTTVSRASLHNEDLI
KEKDIRILDKVVIKKAGDIIPEVVNVLVEQRTGEEKEFSMPTECPECGSELVRIEGEVAL
RCINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFKENLVRNVADLYKLTKEQVIQL
ERMGEKSTENLISSIQKSKENSLERLLFGLGIRFIGSKAAKTLAMQFESLENLKKASKDE
LLAVDEIGEKMADAVITYFHKEEMLELLNELQELGVNTLYKGPKKVKAEDSDSYFAGKTI
VLTGKLEELSRNEAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKLTKAQELNIEVWNEE
QLMEELKK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggacaaagaaacagccaagcagcgggcagacgaactgcgccgcaccatcaacaagtat
agctatgaatattacaccctagatgaaccgagcgtccctgatgccgaatacgacagattg
atgcaggagctgattgcgatcgaggaggagcatccagacctcagaacgcctgactctcct
acgcagcgcgtcggcggagccgtgcttgaagcgtttcaaaaggtcacccacggcacacca
atgctcagtctgggcaacgcctttaatgctgatgatctccgtgatttcgaccgccgtgtg
cgccaagccgtcggtgacgatgtggcgtataatgtggagctgaaaatagacggtcttgct
gtttctctccgttatgaagacggctattttgtcagaggagccacccgaggtgacggaacg
acgggagaggacattacggagaatctgaagacgattcgcaatatccccctcaaaatgaac
cgtgagctgtcgatcgaagtgcgcggcgaggcgtatatgccgaagcgttcgtttgaagca
ctcaatgaggaacgaattaaaaatgaagaagaaccgttcgctaatccgcgaaatgccgcg
gcaggatcacttagacagcttgatccgaaaattgcagcgaaacgaaacctcgatatcttc
gtctacagtatagcggagcttgacgagatgggtgtggagacgcaaagccaagggcttgat
tttctcgacgaactcggatttaaaacgaatcaggaacgaaaaaaatgcggcgacatagaa
gaagtcattacgctgatcgatgagcttcaggcgaagcgcgctgacctgccgtacgaaata
gacggcattgtcattaaagtcgattctctcgatcagcaggaggagctcggttttacggcg
aaaagcccgcgctgggccatcgcgtataagtttcctgctgaagaggtcgtgacgaagctt
ctcgatatcgaattaaatgtcggcagaacgggtgtgatcacgccgaccgcgattcttgag
ccggtaaaagttgccggcacaacggtctcaagagcatcccttcataacgaagatttaatt
aaagagaaggacattcggattttggataaggtcgtcatcaaaaaagcgggcgatatcatt
ccggaagtcgtgaacgtcctcgttgaacagcgcacaggagaagaaaaggaattcagcatg
ccgacggaatgtcctgaatgcggcagtgagctcgtccggatcgaaggagaagtggcgctt
cgctgcattaaccctgaatgtccggcgcaaatccgggaagggctgatccatttcgtttcc
cgcaatgccatgaacattgacgggctcggcgaacgagtgatcacacagctgtttaaggaa
aaccttgtccgcaatgtggcagatttatataagctgacgaaggaacaagtcatccagctc
gaacgcatgggtgaaaagtccactgaaaacctgatcagctccatccaaaaatcaaaagaa
aattcgttagagcgcctgctgtttgggcttggcatccgctttatcggatcaaaggctgca
aagacgctcgccatgcagtttgaaagcttggagaacctgaaaaaagcctctaaagacgaa
cttctcgcggttgatgaaatcggtgaaaaaatggctgacgcggtcatcacctattttcat
aaagaagaaatgcttgaactcttgaatgaacttcaggagctgggcgtaaacacgctttac
aaaggcccgaaaaaagtaaaggcagaggacagtgattcttactttgccggtaaaacaatt
gttctgacaggaaagctggaagaactgtcaagaaacgaagccaaagcgcaaatcgaagcg
ctgggcggaaaactgacgggaagcgtcagcaaaaacacagacttggtcatcgccggagaa
gcggcgggaagcaagctgacaaaagcacaagagctgaacattgaagtgtggaatgaagaa
cagttaatggaagagctaaagaaataa

DBGET integrated database retrieval system