Bos javanicus (banteng): 133239108
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Entry
133239108 CDS
T11659
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
bjv Bos javanicus (banteng)
Pathway
bjv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133239108 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bjv03037
]
133239108 (PCDH15)
04515 Cell adhesion molecules [BR:
bjv04515
]
133239108 (PCDH15)
Cilium and associated proteins [BR:
bjv03037
]
Primary cilia and associated proteins
USH complex and associated proteins
133239108 (PCDH15)
Cell adhesion molecules [BR:
bjv04515
]
Cadherins
Protocadherins
133239108 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_Cad99C_N
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
CDH23_a-b
PRIMA1
Motif
Other DBs
NCBI-GeneID:
133239108
NCBI-ProteinID:
XP_061258643
LinkDB
All DBs
Position
26:4601590..5639818
Genome browser
AA seq
1772 aa
AA seq
DB search
MFQQFSLWKWFVSGIILGCLFTVCLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSLVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTHDCRPLTYQAAIPELRTPEELNPIIV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYVYTDMNPGDSVIQLTAVDADEGS
NGEITYEILVGAQGDFIINKTTGLITIAPGVELMVGRTYALTVQAADNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVRAVDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQ
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVIVAFDDGEPVMFSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATRGTMVGVISAAAINQSIVYSIVAGNEEDKF
GINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDH
PPVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVEAY
TGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADILVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQRQAECTKTARIQSALPAAKPAAPAPTPVAMPPPPPPPPG
AHLYEELGDSTMYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEEKAKKVKPKVEI
REPSEEEEVVVTIEKPPPAEPTYTTWKRARIFPMIFKKVRGLADKRGIIDLEEEEWQRRL
EEEDKDYLKLTLDQDEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEE
EESSTPESEESESTESEGEKARKNIFVARRRPVVEEVKEIKGRKKEPAEEPEELKVEEEE
ESPAEEQKSELAPVEEPTDLESRDVTEEGSAESASVEGGVESEEESESSSISSSSESQSG
GPWGFQVPEYDPSKYASKKSPGANSDGYNTAL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacagttttctctctggaaatggttcgtttcagggattatccttggttgtctc
ttcacagtctgcttgggccaatatgatgacgattgcaaactagctaggggaggaccaccg
gccaccatagttgccattgatgaagagagtcggaatggtacaattctggtggataacatg
ctgatcaaagggactgctggaggaccagacccaaccatagaactctctttaaaggacaac
gtggattactgggtattgttggatcctgtcaaacaaatgcttttcctgaacagcacaggc
agagttttggatagagaccctccaatgaacatacactctctcgtggtgcaagttcagtgc
atcaacaaaaaagtgggcactgttatctaccatgaagttcgaattgtggtgagagacaga
aatgacaactcacccacattcaagcatgaaagctactatgccacagtaaatgagctcact
ccagttggcaccacaatcttcacaggattttcaggagacaatggagctacagacatagat
gatggcccaaatggacagatagaatatgttattcaatataatccagatgatccaacttcc
aacgacacttttgaaattcccctcatgttgactggaaatgtagtgttaaggaagaggctc
aactatgaagataagactcgctactttgtcatcatccaagctaatgaccgtgcacaaaac
ctaaatgaacggcgaaccacaaccaccaccctcacagtggacattctggatggagatgac
ctgggtccaatgtttcttccatgtgtcctcgtgccaaacactcatgactgtcgcccactc
acctatcaagctgccatacctgagctgagaactccagaagaactgaaccccatcattgtt
acgccacccatccaagccattgatcaggaccggaatatccagccaccttcagataggcca
ggcatcctctattccatccttgttgggactcctgaggattacccacgattttttcatatg
catcctaggactgcagaacttagtctcctggagccagtaaatagagactttcaccagaag
tttgatttggttattaaggctgaacaggacaatggtcatcctcttcccgcttttgccagt
ctacatattgagatactggatgaaaacaatcagagcccatatttcacaatgcctagttat
caaggctatattctggaatctgctccagtgggagcaactatttctgacagtctgaatttg
accacccctctaagaattgtagctctggacaaggatatagaagatactaaagacccagag
cttcacctttttttgaatgattacacttcagtctttactgtcacacagactggaatcact
cgctacctcaccttacttcaaccggtggacagggaagaacagcaaacttacaccttttcg
ataacagcatttgatggtgttcaagaaagtgagccagttattgtcaatattcgggtgatg
gatgcaaatgataacactccaaccttccctgaaatatcctatgatgtctatgtttataca
gatatgaatcctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtca
aacggggagatcacatatgaaatcctggttggggctcagggagacttcatcatcaataaa
acaacagggcttatcaccatcgctccgggggtggaattgatggttggacggacttacgcg
ctcaccgtccaagcagcggataatgctcctccagcagagagaaggcattccatctgcact
gtgtacattgaagtgcttcctccaaataatcaaagccctcctcgctttccccagctgatg
tatagccttgaaatcagtgaggccatgaggatcggtgctgttttattaaatctacaggcg
actgatcgagagggagacccaataacatatgccattgagaatggagatccacagcgagtt
ttcaatctttcagaaactactgggattctaaccttagggaaagccctggacagggaaagc
actgaccgctacattctgatcatcactgcttctgatggcaggccagatgggacctcgact
gccacggtaaacgtggtggtgacagatgtcaatgacaacgcaccagtctttgatccctat
ctgcccagaaatctgtcagtggtagaagaagaagccaatgcctttgtgggtcaagtcagg
gcagtagatcctgatgctggaataaatggccaagtgcactacagcttgggtaacttcaac
aatctttttcgcatcacatccaatggaagcatttacacggccgtgaagcttaacagagaa
gtccgggactactatgaacttgttgttgtggcaactgatggagcagtacatcctcgtcat
tcaactcttactctggccatcaaggttttggatattgatgataatagccctgtgttcacc
aattcaacatatactgtcgttgttgaggagaacctgccagctgggaccactttccttcaa
atagaggccaaagatgttgacctcggagcaaatgtgtcttatcggataagaagtccagaa
gtgaagcacttttttgcactacatccatttacgggagaactttcccttttaaggagtttg
gactatgagtcgtttccagaccaggaagcaagtatcacttttctagtggaggcctttgat
atttacggaacaatgccgcctggcattgctactgtcacagtgatagtgaaggatatgaac
gattaccctccagtatttagtaaacgaatctacaaaggaatggtggctccagatgctgtc
aagggtacacctataacgactgtttacgccgaagatgcagacccccctggattacctgca
agccgtgtgagatatagggtagatgatgtccaatttccttatcctgcaagtatttttgat
gtagaagaggattctggaagagtaataactcgagttaatcttaatgaagaacctacaaca
atttttaagttggtcattgttgcttttgatgatggtgagcctgtgatgttcagcagtgcc
actgtgaagattcttgtcttacatccaggagaaatcccacgctttacacaagaggaatac
agacctcctccagtaagtgaacttgcaaccagagggactatggtgggtgtaatttctgct
gcagccatcaatcagagcattgtatactccattgttgcaggaaatgaagaggataagttt
ggaatcaataacatcacaggagtaatctacgtgaatgcccctctggattatgaaacaagg
acaagctatgtacttcgagttcaagctgattccctggaagtggtcctcgccaatctccga
gttccttcaaaaagcaatacagctaaagtgtatattgagattcaggatgaaaatgatcat
cccccagtgtttcagaaaaaattctacattggaggtgtgtctgaagatgcaaggatgttt
gcttctgtgctaagagttaaggcgactgataaagatactggcaattatagtgccatggca
tacagactcataataccaccaattaaagaaggaaaggaaggattcgtggtggaagcatac
acagggcttatcaaaacggctatgctcttccataacatgaggcggtcttactttaagttt
caagtcatcgcaactgacaactatgggaagggactaagtggcaaagcagatattctggtc
tctgtggtcaatcagctggatatgcaagtcattgtttctaacgtgccccctactctagtg
gaaaaaaagatagaagaccttacagagattttggatcgctatgttcaggagcaaattcct
ggtgccaaggttgtggtggagtccattggtgctcgccggcatggcgatgccttttctcta
gaagactataccaagtgtgacttgactgtctatgcaatcgacccccaaaccaacagagcc
atcgacagaaatgagctttttaaatttttagatggcaaactgcttgatatcaataaagac
tttcagccatattatggggaaggaggacgcattctggagatccggactccagaggcagtg
accagcattaaaaagcgaggagaaagtctcggctataccgaaggggcgctcctggctctg
gccttcatcatcatcctctgctgtattcctgccatcttggtggttttggtcagctacaga
caacgccaagctgagtgcaccaagacagctcgaatccagtccgccctgcctgcggctaaa
ccagcagcgccagccccgacaccagtggccatgcccccgccaccgccgccgcctcccggt
gctcatctctatgaagaactcggggacagcacgatgtatgaaatgcctcaatatggaagt
cgtcgtcgtctgttaccaccagctggacaagaggaatatggtgaggtggttggtgaagct
gaagaggaatacgaggaggaagaggaaaaggcaaagaaagtcaaaccaaaagttgaaatt
agagagcctagtgaggaggaagaagtagtagtcactattgaaaagccacccccagctgaa
ccaacatatacaacatggaagagagccaggatattcccaatgatttttaagaaagttaga
ggactagctgataaaagaggcatcatcgaccttgaggaggaagagtggcagcgacgcctt
gaggaagaagataaagattatttgaaactaactctggaccaagatgaagctacagaaagc
acggtagaatcagaggaggaatcctcaagtgactatactgagtacagtgaagaggaatcc
gagttcagtgagtctgagactacggaagaggagtctgagtcagagacaccctctgaggag
gaagaaagttctacccctgaatcagaagagtcagaatccacagagtcagaaggggaaaag
gcaaggaaaaatatttttgttgcaagaagaaggcctgttgttgaagaggtcaaggaaatc
aaaggtagaaaaaaggagccagctgaagagccagaagaactgaaggtggaagaagaggag
gaatccccagcagaagaacagaaaagtgagctggcccctgtggaagaaccaacagacctc
gaatctcgagacgtcactgaggagggcagtgcagaatcagcttcagtggaaggaggtgtt
gaaagtgaggaagagtcagaatcaagtagtattagcagcagtagcgaaagtcagtctgga
ggtccttggggctttcaggtgccagagtatgacccaagcaagtatgcaagcaagaagtct
ccaggagcaaactcagatggttacaacacagcactgtaa
DBGET
integrated database retrieval system
