Bubalus kerabau (carabao): 129621200 Help Entry 129621200         CDS       T11435                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism bke  Bubalus kerabau (carabao) Pathway bke04015   Rap1 signaling pathway bke04115   p53 signaling pathway bke04145   Phagosome bke04148   Efferocytosis bke04151   PI3K-Akt signaling pathway bke04350   TGF-beta signaling pathway bke04510   Focal adhesion bke04512   ECM-receptor interaction bke04820   Cytoskeleton in muscle cells bke05144   Malaria bke05165   Human papillomavirus infection bke05205   Proteoglycans in cancer bke05206   MicroRNAs in cancer bke05219   Bladder cancer Brite KEGG Orthology (KO) [BR:bke00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     129621200 (THBS1)    04350 TGF-beta signaling pathway     129621200 (THBS1)    04151 PI3K-Akt signaling pathway     129621200 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129621200 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     129621200 (THBS1)    04148 Efferocytosis     129621200 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     129621200 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     129621200 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     129621200 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     129621200 (THBS1)    05205 Proteoglycans in cancer     129621200 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     129621200 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     129621200 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     129621200 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bke04131]     129621200 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bke00536]     129621200 (THBS1) Membrane trafficking [BR:bke04131]  Endocytosis   Phagocytosis    Opsonins     129621200 (THBS1) Glycosaminoglycan binding proteins [BR:bke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129621200 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  129621200 NCBI-ProteinID:  XP_055393315 LinkDB All DBs Position 10:40139892..40154778 Genome browser AA seq 1171 aa AA seqDB search MGLAWGLGVLLLLHACGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDKKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVFV TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRTGDEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPASDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKAR ETKACQKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQ ICNKQDCPIDGCLSNPCFAGVQCTSYPDGSWKCGACPPGYSGDGVECKDVDECKEVPDAC FNHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNK NANCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLLCVANATYHCRKDNCP NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLE HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDICPENVDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcggtgtcctgctcctgttgcatgcctgtggctccaaccgc attccagagtctgggggagacaacagtgtgtttgacatctttgaactcaccggagctgcc cgcaagggctctgggcgccgactggtgaagggtcctgacccttctagcccagctttccgc atagaggatgccaacctgatcccccctgtgcctgacaagaagttccaagacctagtggat gctgtgcgggcggagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc cggggtaccctgctggctgtggagcggaaagaccactctggccaggtcttcagcgtggtc tccaatggcaaggcgggcaccttggacctgagcctgaccgtgcaggggaagcagcacgtg gtgtcggtggaagaagcactcctggcgactggccagtggaagagcatcaccctgtttgtg caggaggacagggcccaactgtacatcgactgtgagaagatggagaatgcggagctggat gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcattgcc aaaggaggtgtcaatgacaatttccagggggtgctgcagaatgtaaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccagtgtctttgtc acccttgacaacaacgtggtgaatgggtccagccccgccatccgcaccgactacattggc cacaagacaaaggacctgcaagccatttgtggcatctcatgtgacgagctgtccagcatg gtcctggagctcaggggtctacgcaccattgtgaccacgctgcaggacagtatccgcaaa gtgaccgaagagaacaaagagctggccaatgagctgaggaggcccccactctgctaccac aacggagtgcagtacaggactggcgacgagtggacggtggacagctgcactgagtgtcgc tgccagaactcagttaccatctgcaaaaaagtgtcctgtcccatcatgccctgctccaat gccacagttcccgatggagaatgctgcccacggtgctggccagccagcgactctgcagac gatggctggtccccgtggtctgagtggacctcttgctctgtgacctgtggcaatggaatc cagcagcgtggccgctcctgcgacagcctcaacaacagatgcgagggctcctctgtgcag acgcggacctgccacatccaggagtgtgacaagagatttaaacaggatggcggctggagc cactggtccccatggtcatcttgctccgtaacatgtggagacggtgtgatcacaaggatc cggctctgcaactcccccagcccccagatgaatgggaagccgtgtgagggcaaagcccgg gagaccaaagcctgccagaaagacgcctgccccatcaatggaggctggggaccctggtca ccatgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgc aacaaccccacaccccagtttggaggcaaggactgcattggtgatgtgacagaaaaccag atctgcaacaagcaagactgtcccattgatggatgcctgtccaatccctgctttgctggt gtccagtgtaccagctaccctgatggcagctggaagtgtggtgcctgtcccccaggctat agtggagatggcgtcgagtgcaaagacgttgatgagtgcaaagaagtccctgatgcctgc ttcaaccacaatggagagcacaggtgtgagaacacagaccccggctacaactgcctgccc tgcccaccgcgcttcactggctcgcagcccttcggccggggcgtggaacatgccaccgcc aacaagcaggtatgcaagccccgaaacccctgcacagacgggacacacgactgcaacaag aacgccaactgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgcaag cctggctacgccggcaacggcatcatctgcggggaggacacagacctggacggctggccc aacgaggacctgctgtgcgtggccaatgcaacttaccactgcagaaaggataattgcccc aaccttcccaactcggggcaggaagactatgacaaggatggaatcggcgatgcctgcgat gatgacgatgacaatgataagattccagatgacagggacaactgtccattccattacaac ccagcccagtacgactatgacagagatgacgtgggagaccgctgtgacaactgcccgtac aaccacaacccagaccaggccgacacagataacaatggggaaggagacgcctgcgcagct gacattgatggggacggtatcctcaatgaacgggacaactgccagtatgtctacaatgtg gaccagaaagacactgacatggacggggttggtgatcaatgtgacaactgccccctggaa cacaatccagaccagctcgactctgactcggaccgcattggagacacctgtgacaacaat caggatattgatgaagacggccaccagaacaacctggacaactgtccctacgtgcccaat gccaaccaggctgaccatgacaaggatggcaaaggcgacgcctgtgaccatgatgacgac aatgatggcattcctgacgaccgggacaactgcaggctggtgcccaatcctgaccagaag gactctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccaggacaaggtg ccagacattgatgacatctgtcccgaaaatgttgatatcagtgagactgatttccgccga ttccagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgta cgccatcagggtaaagaacttgtccagactgtcaactgtgaccctggacttgctgtaggt tatgacgaatttaacgccgtggacttcagcggcaccttcttcatcaacaccgagagggac gacgactatgccggctttgtgtttggctaccagtccagcagccgcttctatgttgtgatg tggaagcaagtcactcaatcctactgggacaccaaccccacgagggctcaggggtactct ggactttccgtaaaggttgtaaactccaccacggggcctggcgagcacctgcggaatgcc ctgtggcacacaggaaacacccctggccaggtgcgcacactgtggcatgaccctcgtcac atcggctggaaagatttcactgcctacagatggcgtctgagccacaggccaaagacaggt ttcatcagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctat gacaaaacctatgccggtgggagactaggcttgtttgtcttctcgcaagaaatggtgttc ttctccgacctgaaatatgaatgcagagattcctaa

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