Cytobacillus kochii: CKF48_07175 Help Entry CKF48_07175       CDS       T05194                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism bko  Cytobacillus kochii Pathway bko03030   DNA replication bko03410   Base excision repair bko03420   Nucleotide excision repair bko03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bko00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CKF48_07175    03410 Base excision repair     CKF48_07175    03420 Nucleotide excision repair     CKF48_07175    03430 Mismatch repair     CKF48_07175  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bko03032]     CKF48_07175    03400 DNA repair and recombination proteins [BR:bko03400]     CKF48_07175 Enzymes [BR:bko01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CKF48_07175 DNA replication proteins [BR:bko03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CKF48_07175 DNA repair and recombination proteins [BR:bko03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CKF48_07175    NER (nucleotide excision repair)     GGR (global genome repair) factors      CKF48_07175    MMR (mismatch excision repair)     DNA ligase      CKF48_07175   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CKF48_07175 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2 Small_EgtBD HHH RNA_pol_A_CTD Motif Other DBs NCBI-ProteinID:  ASV67132 UniProt:  A0A248TG90 LinkDB All DBs Position complement(1426103..1428109) Genome browser AA seq 668 aa AA seqDB search MEEKKVEQRVKDLQNLLNQYNYEYHVLDQPSVPDAEYDQLLHELIALEEQHPELKTEDSP THRVGGQVLDMFEKVEHRTPMLSLANAFNEQDLRDFDRRVRQAVGENISYVCELKIDGLA VSLRYEDGLFAIGATRGDGSIGENITVNLRTIRSIPLRVKETVTFEVRGEAFMPRKSFLS LNKGKEERGEEPFANPRNAAAGSLRQLDPKIAASRNLDIFVYAMADEGKTGIRSHSEGLD FLDSQGFKTNKERQKCKNIDEVIQYIEKWTENRPDLSYDIDGIVIKVDSYDQQDELGTTA KSPRWAIAYKFPAEEVVTQLRDIELSIGRTGVVTPTALLEPVRVAGTTVQRASLHNEDLI REKDIKLGDYVVIKKAGDIIPEVVNVLPERRTGEEVDFHMPTHCPACESELVRLEEEVAL RCINPKCPAQIREGLIHFVSRNAMNIDGLGEKVISQLFAEKLIEDVADIYHLTYEQLIQL ERMGEKSVNNLLKAIEVSKDNSLEKLLFGLGIRHVGAKAAKTLAQTFGEMGKIQQATMED FISINEIGDKMADALVTYFEQEEVTSLIQELQDVGVNLTYKGPKPVNIAESDSVFAGKTI VLTGKLEQLARNEAKEKIEALGGKVSGSVSKKTDLVIAGEDAGSKLTKAQELGITIWDEE KLIEELNS NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt ttggaggaaaagaaggtagaacaaagggtcaaggatttgcaaaatctccttaatcaatat aattatgaatatcatgtacttgatcaaccatctgtgcctgatgcagaatatgaccagctt cttcatgagctaattgcacttgaagagcaacatccagagttgaaaacagaagattcccca acgcatcgggtcggtgggcaagtattagatatgtttgaaaaagttgaacatcgcacgccg atgctcagtttagccaatgcatttaatgagcaagacttaagggattttgaccgtcgtgtt cgccaggcagtgggtgagaatatctcatatgtctgcgagttaaaaattgatggactggct gtctctcttcgctatgaagatggattgtttgcaatcggagcaacgcgtggagatggctcc attggtgaaaacattaccgttaaccttcgcaccattcgttccatacctctgcgggtaaag gaaacggtaacctttgaagtacgcggagaggcgttcatgcctagaaaatcgttcttaagt ttaaataaaggaaaagaagaacgaggtgaggaaccctttgcgaaccctcgaaatgctgct gcgggttcacttaggcaattagatccaaaaatcgctgcatcaagaaatttagatatattc gtttatgctatggctgacgaggggaaaacgggtattcgttctcatagtgaaggtctggac tttcttgactctcaggggtttaaaacgaacaaagagcgccagaagtgtaaaaatatagat gaggtcattcaatatatcgagaaatggacagaaaaccgaccagacttatcgtatgatatt gatggaatcgttattaaagtcgattcatatgaccaacaggatgaactcgggacaacagca aagagtccgagatgggcgattgcttataagtttcctgctgaagaggtagtcacgcagtta agagatattgaattaagtatcggtcgcaccggtgtagtgacgccaacagcattacttgaa cctgttagagttgcaggtactaccgtgcaacgtgcatcccttcataatgaagaccttatt cgtgagaaggatattaagctaggtgattacgttgtgattaagaaagcaggcgacatcatc cctgaagttgtcaatgtattacctgaaagaagaacgggagaagaagttgattttcatatg ccaactcattgcccggcatgtgaaagtgaacttgtgcgtttagaggaagaagtcgcactt cgttgtattaatccgaaatgtcctgcgcaaataagagaggggcttattcattttgtctca cgaaatgcgatgaatattgacgggctaggggaaaaagtaattagccaattatttgcagaa aagttaattgaagatgtggcagatatttatcatcttacgtatgaacagcttattcaatta gagagaatgggcgaaaaatctgttaacaacttgctaaaggccattgaagtctctaaggat aattctttagaaaaattattattcggactagggatccgtcatgtgggggcgaaagcggca aaaacacttgcgcaaacatttggagagatgggcaaaatccagcaggcaaccatggaggat tttattagcattaatgaaataggcgataagatggctgatgcactcgtcacatattttgaa caagaagaagtaacatctctcattcaagagttacaagatgttggagtgaatctgacttat aagggaccaaaacctgtaaatatagcggaatctgattctgtttttgctggtaaaaccatt gtgttaacgggtaaattagaacagcttgctagaaatgaagccaaggaaaaaattgaagct ctaggaggcaaggtctctggcagtgtaagtaagaaaacagatttagtcattgccggagaa gacgcaggctcgaaattaaccaaagctcaggaattaggcattactatttgggacgaggaa aaattgattgaggaattaaattcgtaa

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