Blautia sp. SC05B48: EYS05_14245
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Entry
EYS05_14245 CDS
T06243
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
blab
Blautia sp. SC05B48
Pathway
blab03030
DNA replication
blab03410
Base excision repair
blab03420
Nucleotide excision repair
blab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYS05_14245 (ligA)
03410 Base excision repair
EYS05_14245 (ligA)
03420 Nucleotide excision repair
EYS05_14245 (ligA)
03430 Mismatch repair
EYS05_14245 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blab03032
]
EYS05_14245 (ligA)
03400 DNA repair and recombination proteins [BR:
blab03400
]
EYS05_14245 (ligA)
Enzymes [BR:
blab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EYS05_14245 (ligA)
DNA replication proteins [BR:
blab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EYS05_14245 (ligA)
DNA repair and recombination proteins [BR:
blab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EYS05_14245 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYS05_14245 (ligA)
MMR (mismatch excision repair)
DNA ligase
EYS05_14245 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EYS05_14245 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
HHH_5
Nlig-Ia
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QCU03290
UniProt:
A0A4P9EF24
LinkDB
All DBs
Position
3062330..3064291
Genome browser
AA seq
653 aa
AA seq
DB search
MNESSIKKMKELGEKLREASRAYYQEDREIMSNVEYDALYDTLSALEKETGIVLADSPTV
NVGYEAVEQLPKEEHERPMLSLDKTKEREALREFIGEHPTLLSWKLDGLTIVLTYENGEL
IKAVTRGNGIVGEVITNNARVFKNIPLKISFKGRLVLRGEAIITYSDFEKINETIGDADA
KYKNPRNLCSGSVRQLNNEITAKRNVRFYAFSLVSAEGVDFRNSREVQFRWLNEQGFEVV
EYRKVTAETLDEAMDYFAEAVTTNDFPSDGLVALYDDIAYGESLGTTAKFPRNAMAFKWA
DEMRDTRLLEIEWSPSRTGLINPVAIFEPVELEGTTVSRASVHNISIMKELKLGIGDTIR
VYKANMIIPQIAENLTGSGNAPIPHNCPACGQETIVKKENDVECLFCVNPGCPAKKIKSF
GLFTSRDAMNIDGLSEATLEKFIARGFIHDFGDIFEISRYKDEIVEMEGFGQKSYDNLME
SLERAKETTLPRVIYSLGIANIGLANAKVICRHFDNDLDRIRHASLEEVSDIDTIGPVIA
GNLVAYFKDEDNNRRLDHLMSFLHIQEDSPKQEQIFEGMNFVITGSLVHFGNRSEAKELI
ESLGGKVTGSVTKKTNYLINNDIQSNSSKNKKARELGIPILSEEDFRKLAGVQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatcatccataaaaaaaatgaaagagctgggagaaaaactccgggaagcgtcc
agggcctattatcaggaagacagggagatcatgtccaacgtggagtacgacgccctgtac
gacactctgagcgcgctggagaaagaaacagggatcgttctggcagacagtccaaccgtt
aatgtaggatatgaggcagtggaacagcttcccaaggaggaacatgagagaccgatgctg
tctctggacaagactaaagagagagaagctttgagagagtttataggggaacatcctaca
cttttatcctggaagctggatggcttgacgatcgtgcttacctatgaaaacggagagctt
ataaaggcagttaccagggggaatggtattgtgggagaggttattaccaataatgccaga
gtatttaagaacatacccctgaaaatttcttttaaagggagactggtccttcgcggagaa
gccatcattacctattcggattttgaaaagatcaacgaaaccatcggagatgcagacgcc
aaatacaaaaatcccagaaatctctgcagtggttctgtccgtcagctgaataatgaaatt
acagcgaagagaaacgtacggttttatgctttttctttagtgagtgcggaaggtgtggat
ttccgaaattccagggaggtgcagttccggtggctgaatgaacagggctttgaggttgtg
gaatatcgaaaagtcacagcagaaactctggatgaagcgatggattactttgcggaagca
gttacgaccaatgattttccgtcagatgggcttgtggcattgtatgatgatattgcttac
ggagaatctctgggaactacggccaagtttccaaggaatgccatggcatttaaatgggcc
gatgagatgcgtgatacgagacttctggagattgagtggagcccgtccaggaccggattg
atcaatccggtagcaatttttgagccggtggaactggaaggcaccacagtgagcagagcc
agtgtgcataacatcagtatcatgaaagaactgaaactggggatcggagataccattcgt
gtatacaaagcaaatatgatcattcctcagatcgcggaaaatctgaccggaagcggcaat
gcaccgatcccgcataactgcccggcctgcggacaggaaacgatagtgaagaaagaaaac
gatgtggaatgtcttttctgcgtcaatccggggtgcccggccaagaagatcaagtccttt
gggctttttacaagcagggatgccatgaatatcgacggactttccgaggcaacactggag
aaatttattgccaggggatttatccatgactttggcgatatttttgagatcagccggtat
aaagatgagattgtggaaatggagggctttgggcagaaatcctatgataatcttatggaa
agtctggaacgggcgaaagagactacacttccaagggtgatctacagtcttgggatcgca
aatatcggtctggctaatgcaaaagtgatctgccgccattttgacaatgatctggacagg
atacgtcatgccagtctggaagaggtcagtgatattgataccatcgggccggtcattgcc
ggaaatctggtagcttattttaaggatgaggataacaatcgccgcctggatcatctgatg
agctttcttcatattcaggaggacagtcccaaacaggaacagatctttgaaggaatgaat
tttgtgatcacaggaagtctggtgcactttggaaatcgaagtgaggccaaagagctgatc
gaatccctgggaggcaaggttaccggttcagttaccaaaaagaccaattatctgatcaat
aacgacatccagtcaaattcatccaaaaacaaaaaggcaagagaactggggattccgatc
ctttcagaagaagattttcggaaacttgccggagtacagtaa
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