Bremia lactucae (lettuce downy mildew): 94345655
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Entry
94345655 CDS
T10371
Symbol
CCR75_001883
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94345655 (CCR75_001883)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
blac03041
]
94345655 (CCR75_001883)
Spliceosome [BR:
blac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
94345655 (CCR75_001883)
Complex C
U5 SnRNP specific factors
94345655 (CCR75_001883)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
EFG_III
EFL1
GTP_EFTU_D2
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
94345655
NCBI-ProteinID:
XP_067817084
UniProt:
A0A976FIS0
LinkDB
All DBs
Position
LG4:complement(<6145138..>6148259)
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AA seq
986 aa
AA seq
DB search
MEESLYDEFGNYIGPELHSSEDESSSASESDPTSDHESEEAIKDAGRPMDALVLHNDEDN
AIVLHEDKQYYPDADEVYGDAEVLVMEEDAQAIEQPLIEPVKIKTFSVLEQKIPRTTYST
HFLTSLMDHPQLIRHVAILGDLHHGKTLFTDLLVQQTHVDKWDPALEKRYTDTRKDEQDR
KVSIKSTPVSLVLPTSKGKHFLLNILDCPGHVNFSDESTAALQVADGAVLVVDAIEGVMM
NTERLVKAALRANVAIVVVLNKVDRLIIELKLPPADAYFKLLHTIEEINAIITANTLSTD
ETRRVSPELGNVCFASGQHGWSFTLESFASVYADTYPSIPPSTLATRLWGDKYYNPQTRT
FTTKPPYAGALRSFVQFVLEPLYKLYTKVLNGDPKELSASLRAMKLRLRKEELNLNPRPL
LKLVLGKFFGNVTTGFMDMIVRYVPSPLVTAATKLEQLYTGNQSKDLRLVQGIQSCDPKA
PLMLNIVKLYSSPDGTTFRAFGRIYSGQVCALKEVKVLGESYSTDDDEDMCTRTIESVAI
AEGQYNIQVNRIPAGNWVLLEGIDASITKSATITDADEMLLQTEQVGIFRPLHLAFYTSA
VVKLAVEPLNPAELPKMLEGLRQISKSYPLVQTKVEESGEHIILCTGELAADCILHDLRR
MYAAIEIKVADPVVAFCETVIEQSSVQCFAETPNRKNKFTMISEPLDVGLDKDIESNRVS
LSHNVQDIVTFFETKYQWDVLAARSVWAFGPEHNGPNVLLDDTLASEVDKTMLLSVQESL
IQGFQWSCREGPLCDEPIRNTKFKLVDAMMASESIYRGGGQVIPTARRVAYSAFLTATPR
MLEPMYALEIQCPADTVSSLYQVLSRRRGHITHDAPKAGSPLYTVRGFVPVIESFGLETD
LRVFTQGQAFVTQVFDHWALVPGDPLDTSVVLRPLEPAPVNDLAREFMVKTRRRKGLSED
VNVSKYFEEPMRRELARHDLEMQHLL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctttgtacgatgaatttggcaactacattggccctgagctacacagtagc
gaggatgaatcctcgtctgcgtcagagagcgatcccactagtgatcacgagagcgaagaa
gcaataaaggatgcaggacgtccaatggatgctctcgtgcttcacaatgacgaggacaat
gccatcgtcctccacgaagacaaacagtattatccggatgctgacgaagtttacggcgat
gcggaagtgcttgtgatggaggaagatgctcaagcaattgagcagccactgattgaaccc
gtaaagataaaaaccttttcagttttggagcaaaaaatccctcgcacaacctattcaacc
cactttttgacaagtttaatggaccacccacaactgattcgacatgtagccatcttgggc
gatctgcaccatggcaaaactttgttcacagatcttctggtccagcaaacgcatgtggat
aaatgggaccccgccctcgagaaacgctatactgatacacgaaaagacgaacaggatcga
aaagtctcgattaagagcacacccgtgtcgctcgtgctgccaacttcgaaaggcaaacac
tttttactaaacattttggactgtccaggccatgtcaatttttccgatgaatcgacggca
gcgttgcaagtggcagatggcgctgttctcgtagtcgatgcgattgaaggtgtgatgatg
aataccgagagattggtaaaagcagcattgcgggcaaatgtagccattgtggtggtgttg
aacaaagtagatcgactaattattgaactcaagttgccacctgcggatgcgtatttcaag
ctcttgcatacaatcgaagagattaatgcaatcatcacggccaacacactgtcgacggat
gagactcgacgcgtgtcgcccgagctggggaacgtttgttttgcctcgggacaacatgga
tggagttttacgcttgaatcctttgcaagcgtttacgccgacacgtacccgtcgattcct
ccatcgactctcgcaactcgtctatggggggacaagtattataatccccaaacgcggaca
tttaccaccaaaccgccatatgcaggcgcattgcgctcgttcgtacaattcgtacttgag
ccattgtacaaattgtacacgaaagtcctgaatggagaccccaaggaattgtctgcatcc
cttcgtgctatgaaattgcgcttacgcaaagaggaattaaatttaaatcctcggccccta
ttaaagctcgtgttgggcaaattctttggcaacgttacgaccgggtttatggacatgatt
gtgcgctacgtgccatcgcctttagtgaccgccgcaactaaactcgagcaactttacact
ggcaaccagtccaaagacctgcgccttgtacaaggaatccaatcgtgcgaccccaaggct
ccgttgatgcttaatattgtcaaactctactcgtcgcccgatgggacaacgtttcgtgct
tttggacgcatttattctggccaagtttgtgctttaaaggaagttaaagtcctgggtgag
tcgtacagtacagatgacgacgaggacatgtgtacacgtacgattgaaagtgtagccatt
gccgaaggacaatacaatatccaagtcaatcggattcccgctggcaattgggtgttgctc
gaaggtatcgatgcatccattacgaaaagtgcgactattaccgatgccgacgaaatgctc
ttacaaactgaacaagttggaatctttcgtccccttcacttggccttttatacatctgcc
gtggtaaaactcgccgtcgagcctttaaatcccgccgagttacccaaaatgctcgaaggg
ttacgccagatcagtaaaagttacccacttgttcagacaaaagtcgaagaaagtggcgaa
cacattattctgtgtactggagaacttgcagcagactgtatcctccacgacttgcgacgc
atgtacgcagccattgaaattaaagtcgcagaccccgtggttgcgttttgcgagactgtc
atcgaacagtcatcggtccaatgttttgcggaaacaccgaatcgaaagaacaagtttaca
atgatttcggaacctctcgatgtcggtcttgataaagacattgaatccaatcgtgtatct
ttatctcacaacgtgcaagacattgtgacgttctttgaaacaaagtatcaatgggatgtc
ctcgccgcgcgttcggtctgggcttttggaccggaacacaacggaccaaatgtgttgctc
gacgatacattggcgtcggaagtggataaaaccatgctcttgagtgtacaagagagtctc
attcaaggttttcaatggagttgtcgagaagggccactctgtgatgaaccgattcgaaat
acgaaatttaaacttgtggatgccatgatggcgagtgaatcgatttatcgtggaggggga
caagtgattcctaccgcacgtcgagtcgcgtactcggcgtttttgacggcgacgccacgg
atgttggaacccatgtatgcattggagattcagtgtcccgcggatactgtgtcgtcgttg
tatcaagtattgagtcgacgacggggacatattacccacgacgcaccgaaagcaggatcg
ccattgtatacggtgcgagggtttgtccccgtgattgaatcgtttggacttgagacggat
ttgcgtgtgtttacacagggccaagcttttgtcactcaagtgtttgatcattgggctctt
gtgccgggggatcccttggatacgagtgtggtattgcgtccattggaacccgcgccggtg
aatgacttggcaagggagtttatggtcaaaacacgacgtcgaaaaggattgagtgaagac
gtgaatgtgagcaagtactttgaagaacccatgcgacgggaattggcgaggcacgatttg
gagatgcaacatcttttgtaa
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