Blastochloris tepida: BLTE_02930
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Entry
BLTE_02930 CDS
T05837
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
blag
Blastochloris tepida
Pathway
blag03030
DNA replication
blag03410
Base excision repair
blag03420
Nucleotide excision repair
blag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLTE_02930 (ligA)
03410 Base excision repair
BLTE_02930 (ligA)
03420 Nucleotide excision repair
BLTE_02930 (ligA)
03430 Mismatch repair
BLTE_02930 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blag03032
]
BLTE_02930 (ligA)
03400 DNA repair and recombination proteins [BR:
blag03400
]
BLTE_02930 (ligA)
Enzymes [BR:
blag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BLTE_02930 (ligA)
DNA replication proteins [BR:
blag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BLTE_02930 (ligA)
DNA repair and recombination proteins [BR:
blag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BLTE_02930 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLTE_02930 (ligA)
MMR (mismatch excision repair)
DNA ligase
BLTE_02930 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLTE_02930 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
BBF91608
UniProt:
A0A348FWC5
LinkDB
All DBs
Position
353726..355849
Genome browser
AA seq
707 aa
AA seq
DB search
MKTSAATLPVELLSPDEAAAELKRLAREIAEHDRLYYQEDAPTVSDADYDALRARNEAIE
ARFPELVRDDSPSRKVGAAPAAKFAKVRHAVPMLSLQNAMSEGEAVEFVARMRRFLGLAD
DAALAITAEPKIDGLSCSLRYVGGRLEVAATRGDGFEGEDVTANVRTISDVPERLSGDVP
EVFEVRGEVYLSHADFAAINARQAAEGKPAFANPRNAAAGSLRQLDPAVTASRPLKFFAY
GWGEVAGDLPADTQFGMVAALKRIGFVTNDLTVLCHSTEELLAHYRLIESRRASLGYDID
GVVYKLDRLDLQERLGFVSRSPRWAIAHKFSAEKAKTVVRDIEIQVGRTGAHTPVAKLEP
VTVGGVVVQNATLHNADEIARLGVRIGDTVEIQRAGDVIPQVLRVIEDAPRGAEPYQFPE
VCQCELKTPLVREELASGEKSAVRRCSGEFACPYQRVEHLRHFVSRRAFDIEGLGEKQVA
FFFEDADLPVKEPADIFTLARRDAENFKKLKDKEGFGVVSARNLFNAIEARRTIALDRFL
YALGIRHVGETTARQLARAYGSWADFEAAARRIAAGDEAARAEMDAIDQIGEAVVDAVAT
YFGEAHNRALVDRLVAEVTIVDAEAPRIESPVAGKTVVFTGTLEKMTRDEAKATAERLGA
KVAGSVSSKTHYVVAGPGAGSKLEKARSLGVSVLSEDEWFKLIGGER
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccagcgctgccactttgccggtcgagctgctgtcgcccgacgaggcggcggcc
gagctgaagcggcttgcccgcgagatcgccgagcacgaccgcctctactatcaggaggac
gcgccgaccgtctccgacgccgactatgacgcgctgcgcgcccgcaacgaggcgatcgag
gcgcgcttccctgagctcgttcgcgacgacagcccctcgcgaaaggtcggcgcggcgccg
gccgccaagttcgccaaggtgcggcacgcggtgccgatgctgtcgctgcagaatgcgatg
agcgaaggcgaagcggtggagttcgtcgcccgcatgcggcgcttcctcggcctcgccgac
gacgcggcgctggcgatcaccgccgagcccaagatcgacggtctgtcgtgctcgctgcgc
tatgtcggcggccggctggaggtggcggcgacccgcggcgacggcttcgagggcgaggac
gtcaccgccaatgtccgcaccatctccgacgtgccggagcggctttccggcgacgtgccg
gaggtgttcgaggtgcgcggcgaggtgtacctgtcacacgccgatttcgccgccatcaac
gcccggcaggcggcggagggaaagcccgccttcgccaatccccgcaacgccgcggccggc
tcgctgcgtcagcttgacccggcggtgacggcgtcaaggccgctgaaattcttcgcctat
ggctggggcgaggtggcgggcgatttgccggccgacacccagttcggcatggtggcggcg
ctgaagcgcattggcttcgtcaccaacgatctcaccgtcctgtgccactcgaccgaggag
ctgctggcgcactaccggctgatcgaaagccggcgcgcctcgctcggctatgacatcgac
ggcgtggtctacaagctcgaccggctcgatttgcaggagcggctgggcttcgtgtcgcgc
tcgccgcgctgggccatcgcccacaaattctcggccgagaaggcgaagacggtggtgcgc
gacatcgagattcaggtcggccgcaccggcgcgcataccccggtggcgaagctggagccg
gtgacggtcggcggcgtggtggtgcagaacgccacgctgcacaatgccgacgagatcgcc
cggctcggcgtccgcatcggcgacacggtggagatccagcgcgccggcgacgtgatcccg
caggtgctgcgggtgatcgaggatgcgccgcggggggcggagccataccagttccccgag
gtctgccagtgcgagctgaagacgccgctcgtgcgcgaggagctggcctccggcgagaag
agcgcggtgcggcgctgctccggcgagttcgcctgcccgtatcagcgcgtcgagcatctg
cggcacttcgtgtcgcgccgggccttcgacatcgaggggctgggcgagaagcaggtcgcc
ttcttcttcgaggatgcggatctgccggtgaaggagccggccgacatcttcacgctggcg
cggcgcgacgccgagaatttcaagaagctcaaggacaaggaaggcttcggcgtcgtctcg
gcgcggaacctgttcaatgccatcgaggcgcggcgcaccatcgcgctcgaccgcttcctc
tatgcgctcggcatccgccatgtcggcgagaccacggcccgccagcttgcccgtgcctat
ggctcgtgggcggacttcgaggcggcggcgcgccgcattgccgccggtgacgaggccgcg
cgcgccgagatggatgccatcgaccagatcggcgaggcggtggtggacgcggtcgccacc
tatttcggcgaggcgcacaatcgcgcgctggtcgatcggctggtggccgaggtcaccatc
gtcgatgccgaggcgccgcgcatcgagagcccggtcgccggcaagacggtggtgttcacc
ggcacgctggagaaaatgacgcgcgacgaggccaaggcgacggccgagcggctgggcgcc
aaggtggcgggctcggtgtcgtcgaagacccactatgtcgtcgccggccccggcgccgga
tccaagctagagaaggcgcgcagcctcggcgtcagcgtgctgagcgaggacgagtggttc
aagctgatcggcggggagcggtag
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integrated database retrieval system
