Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_0742
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Entry
BLIJ_0742 CDS
T02092
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03030
DNA replication
blon03410
Base excision repair
blon03420
Nucleotide excision repair
blon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLIJ_0742
03410 Base excision repair
BLIJ_0742
03420 Nucleotide excision repair
BLIJ_0742
03430 Mismatch repair
BLIJ_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blon03032
]
BLIJ_0742
03400 DNA repair and recombination proteins [BR:
blon03400
]
BLIJ_0742
Enzymes [BR:
blon01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BLIJ_0742
DNA replication proteins [BR:
blon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BLIJ_0742
DNA repair and recombination proteins [BR:
blon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BLIJ_0742
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLIJ_0742
MMR (mismatch excision repair)
DNA ligase
BLIJ_0742
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLIJ_0742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
Seipin
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
BAJ68334
UniProt:
B7GPV4
LinkDB
All DBs
Position
845308..848073
Genome browser
AA seq
921 aa
AA seq
DB search
MSTNEQLAWDFDDGDVAEVRPDTGIARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAE
AAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRV
GGSFSNDFVSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGLA
LNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGEVFMRW
DDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWGADHPR
GTHDVVADQSQAYDLYTRWGVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHALDGIVVK
VDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLKPVYVAG
STVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLREFVMPEF
CPSCGAKLAPAKEGDKDIRCPNVESCPAQLTERVISLASRKAFDIEHLGEQSAIALTNPE
ENRPDSVATYAPNITEVLVAPGEEPDPYEPVEGLELPAAQKPVLSNESGLFDLTAADLRD
VRVWREAAIVEVHETVGANGKKKKVRKRVGGSGLWHQVPAFWTAPTPAKKLTAKQLAERA
QREAAIESAETQGGAASETTGAPTGAEAPLGTMPGFAAASYPEYDVPADAVIVRVDHKTT
RTGVTDVPVIIRPGENTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLA
AIEKATIEDLTAIDGVGPEIAESVVNWFAATREPGDWRGATLRAWQAAGVGVDEAETSSL
PQTLAGKTVVVTGSLEGYSRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKAIKAEE
LGIPMLGEIQFAQLLETGSID
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaacgaacaactggcatgggatttcgacgatggggatgtggccgaggtccgg
cctgataccggtattgcacgttttgcccctggctccgaacaatggatagccgcactgcag
cccactgacgacgacgcgatacgcctcgaccgtttcgacgtgaacacgatgaccgctgag
gccgccgcccgcctgtgggctcgcgtggccgcatgggtggaatccgatcagatcgcctac
tacatcgacgactcacccgtcagctccgacgccgcctacgacgcgcgcatgcgttgcctc
gaacgactcgaagcggcgttcccctcattggacaatccgcagtcgcccacccatcgcgtc
ggcggctccttctccaacgacttcgtctccgtgcgccaccccagccgcatgatgagcctt
gatgacgtcttctccatcgaagagctcaaggattggtacgattcggtgattcgcgacctc
gattggcccgaatccaagcccctgcccatgagctgcgaggtcaaaatcgacggcctcgcc
ctgaacctcatctatcgcaacggcgtgcttgaacagggcttgacgcgcggcgacggcgtt
accggcgaagacatcaccctgaatgtgcgaaccatcggctccattcccgccaacctcggc
ggccccaaggaagacgttccggacttcgtggaaatccgaggcgaagtgttcatgcgctgg
gatgacttccacaccctgaacaacgagcaggaggacgccggacgagcgccctttgccaac
ccgcgcaacgccgccgccggctcgctgcgtcaaaaagaccctcgcatcaccgccacccgt
cgcctgagcttctatgcgcatggtctggggcagctcacctggggggcggaccatccgcgc
ggcacccatgatgtggtcgccgaccagtcgcaggcctacgatctatacaccaggtggggc
gtgccggtctccccgcataatcgtgcggtgacctcattccaggagatcttggacatgatc
gagtactacggcgagcatcgcggcgacatcgagcacgcgctcgacggcattgtcgtcaag
gtcgatgacctgggcctgcagcgcaccctcggtgccacctcgcgcgcgccgcgctgggcc
atcgcctacaaatacccgcccgaagaggtcaacaccgaactgctcaacatcaccgtgcag
gtggggcgtaccggccgtgtgacgccggtcgccgtgctcaaacctgtctacgtggccggc
tccaccgtggctcgtaccacgctgcacaacggatttgaagtcaaacgcaagggcgttctg
atcggcgacaccgtggtggtgcgcaaggccggcgatgtgattcccgaactggtcggcccg
gtgcttgaacggcgcaaagggcgtgaggaccagctgcgcgaattcgttatgcccgagttc
tgcccttcatgcggcgcgaaactggcacccgccaaggagggtgacaaggacattcgctgc
ccgaatgtggaaagctgcccggcccagttgaccgagcgtgtgatttcgctggcctcacgc
aaggcgttcgacatcgagcacttgggcgaacaatcggccatcgctctgaccaacccggag
gagaaccggcctgattcggtggcgacctacgcgccgaacatcaccgaggtgctggtcgcc
cccggcgaagagcctgacccgtatgagccggtggaggggctggaattgccggccgcgcag
aagccggtgttgtccaacgaatccgggttgttcgacctgaccgccgccgatctgcgcgac
gtgcgcgtgtggcgtgaagccgcaatcgtcgaggtgcatgagacggtcggtgcgaacggt
aagaagaaaaaggtgcgtaagcgtgtcggcggctctggcctgtggcatcaggtgcccgcc
ttctggaccgcgcccacgccggccaaaaagctcacggccaagcagctggccgaacgcgcg
caaagggaggccgcaatcgaatctgccgaaacacagggaggtgccgccagcgagacgacc
ggcgcacctaccggggctgaggctccacttggtaccatgccgggctttgccgcagcctcc
tatcccgagtatgacgtgccggccgacgcggtcatcgtgcgcgtggatcacaagaccacg
cgcactggcgtcacggatgtaccggtgatcattcggcccggcgaaaacacgcgcaagatg
ttcgacgaaatggacaaggcccgtcacgccgacctgtggcgtgtgctggtcgcattgtcg
attcgccggctcggtccgcctaccgcacgcctgatcgcctcggcgatgggctcgctggca
gccatcgaaaaggccacgattgaagatctgacggccatcgacggggtgggcccggaaatc
gccgaatcggtggtgaactggttcgccgccacccgcgaacccggcgactggcgcggcgcg
actttgcgtgcttggcaggctgccggcgtgggtgtcgacgaggccgagaccagttcgttg
ccgcagacgctggccggcaaaaccgtggtggtcaccggttcgttggaaggctattcgcgc
gactccgccaaagaggcgattatcgagcgcggcggcaaggcggccggttcggtgagcaag
aagaccgattacgtggtgattggcgcaaacgccggctccaaggccatcaaggccgaggaa
ctcggcatccccatgctgggcgaaatccaattcgcccagctcctagaaaccggtagcatc
gactga
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