Blautia luti: Blut17040_19950
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Entry
Blut17040_19950 CDS
T09496
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
blui
Blautia luti
Pathway
blui03030
DNA replication
blui03410
Base excision repair
blui03420
Nucleotide excision repair
blui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Blut17040_19950 (ligA)
03410 Base excision repair
Blut17040_19950 (ligA)
03420 Nucleotide excision repair
Blut17040_19950 (ligA)
03430 Mismatch repair
Blut17040_19950 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blui03032
]
Blut17040_19950 (ligA)
03400 DNA repair and recombination proteins [BR:
blui03400
]
Blut17040_19950 (ligA)
Enzymes [BR:
blui01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Blut17040_19950 (ligA)
DNA replication proteins [BR:
blui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Blut17040_19950 (ligA)
DNA repair and recombination proteins [BR:
blui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Blut17040_19950 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Blut17040_19950 (ligA)
MMR (mismatch excision repair)
DNA ligase
Blut17040_19950 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Blut17040_19950 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
BRCT_2
PTCB-BRCT
DNA_ligase_ZBD
HHH_5
Zn_ribbon_TFIIB
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
BEI60966
LinkDB
All DBs
Position
complement(2188970..2190814)
Genome browser
AA seq
614 aa
AA seq
DB search
MYDELQALEKETGTVLANSPTISVGYEAVEQLPKEEHETPMLSLDKTKDREVLREFIGEH
QTLLSWKLDGLTVVLTYENGELVKAVTRGNGVVGEVVTNNARVFKNIPLKIPYQGRLVLR
GEAIITYSDFQRINESIEDVDAKYKNPRNLCSGSVRQLNNEITARRNVRFYAFALVSAEN
VDFGNSRAFQFQWLKEQGFDVVEYQMVTAETLDEAMEYFSTAISQNDFPSDGLVALYDDI
VYGDSLGRTAKFPRNAFAFKWADEIRETHLQKIEWSPSRTGLINPVAVFEPVELEGTTVS
RASVHNISIMKELELGIGDNITVYKANMIIPQIAENLTRSSNLEIPVACPACGHATEIRK
VNEVEALYCTNPDCAAKKIKSFALFVSRDAMNIDGLSEATLEKFIARGFIHDFGDIFEIG
KHRDEIVAMEGFGEKSFENLMVNLEKAKETTLAKVIYSLGIANIGLANAKVICRHFDDDL
EQIRHASEEEVSEIDTIGPVIARSLTEYFASEENNRRLDHLMEYLNIKKEEKKEEQIFQG
MNFVITGSVEHFANRAQAKEFIESLGGKVTGSVTGKTNYLINNDTTSNSSKNKKAKELGI
PILSEEDFLKLAGQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgagcttcaggctctggaaaaagaaacgggaaccgttctggcaaacagtccc
accatcagcgtaggatatgaagccgtagagcagcttcccaaagaagaacatgaaaccccc
atgctttctctggataagacgaaagacagggaagttcttcgagagtttataggggaacac
cagacgctgctttcctggaagctggatggacttacagtggttcttacgtatgaaaacggg
gaacttgtgaaggctgttaccagagggaacggtgtggttggtgaggttgtgacaaataat
gccagggtatttaaaaatattccgctgaagatcccatatcagggaaggctggtccttcgc
ggggaagccatcattacctattctgatttccagcggatcaatgaatccattgaggatgtg
gatgcgaaatataagaacccgagaaatctctgcagcggatcagtgcgtcagctgaataat
gagatcactgccagaagaaatgtacgattttatgcatttgccctggtaagtgcagagaat
gtggactttggcaattcccgggcgtttcagtttcagtggctgaaggagcagggatttgat
gtggtagaataccagatggtgacagccgaaacactggatgaggcgatggagtatttttct
acagctatcagccagaatgattttccatcggacgggctggttgcgctgtatgatgatatt
gtatacggagattcgctgggacgaactgcgaagtttccgaggaatgcgtttgcttttaaa
tgggcagatgagatcagggagacccatctgcagaagatagagtggagtccttccagaaca
ggattgattaatccggtagctgtatttgaacctgtagagctggaaggaaccacagtcagc
cgtgccagcgtgcacaatatcagtattatgaaggaactggagctggggattggagataat
attactgtatataaggcgaatatgatcatccctcagatcgcagaaaaccttaccagaagc
agtaacctggagattccggtagcctgtcctgcctgcggccacgcaacagagatccgtaaa
gtgaatgaagtggaggcactttattgtaccaatcccgactgtgcggcaaaaaagatcaag
tcttttgcactttttgtaagcagagatgccatgaatattgatggactctcagaggctacc
ctggagaaatttattgccagaggttttattcatgatttcggagatatttttgaaatcggg
aaacacagagatgagatcgtggcgatggagggattcggggagaaatctttcgagaacctt
atggtgaatctggagaaggcaaaagagaccactctggcgaaagtgatctacagcctggga
attgccaatatcgggctggccaatgcgaaagtgatctgcagacattttgatgatgatctg
gagcagattcgtcatgcttcagaggaagaagtcagtgagatagataccattggcccggtg
attgccagaagcctgacggaatatttcgccagtgaggaaaataaccggcggcttgaccat
cttatggagtatctgaatattaagaaagaagaaaaaaaagaggaacagatctttcagggg
atgaatttcgtgatcacgggaagtgtagaacattttgcaaaccgcgcccaggcgaaagag
tttatcgaatctctgggaggaaaggttacgggatctgtgaccggaaaaacaaattatctg
atcaataacgataccacttccaattcatccaaaaataaaaaagcaaaagagcttggaatc
ccaattctttcagaagaagatttcctgaaacttgcaggacaataa
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