Bradyrhizobium lupini: AB3L03_26245
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Entry
AB3L03_26245 CDS
T11005
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
blup Bradyrhizobium lupini
Pathway
blup00300
Lysine biosynthesis
blup00550
Peptidoglycan biosynthesis
blup01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3L03_26245
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB3L03_26245
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
blup01011
]
AB3L03_26245
Enzymes [BR:
blup01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB3L03_26245
Peptidoglycan biosynthesis and degradation proteins [BR:
blup01011
]
Precursor biosynthesis
Amino acid ligase
AB3L03_26245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XDI29565
LinkDB
All DBs
Position
5521168..5522640
Genome browser
AA seq
490 aa
AA seq
DB search
MKLRDLLDQDVQGNDAAIEPAVAALDVTGVALDSRAVKPDDLFFALAGSKTDGARFIDAA
IAAGAVAVVGDHAPDGCKVPFITVANPRRALALAAARFFPAQPATIAAVTGTSGKTSVAA
FTRQIWERLGHASASIGTIGLVSPKRTVYGSLTTPDPIALHRQLDEIAREGVTHLAFEAS
SHGLDQYRLDGVRVSAGGFTNLSRDHMDYHPTVAHYLAAKLRLFRELVPPGGAAVISADH
DCSAEAISAANSRGLRVMAVGRNGDGAGEGIRLAGAEVEGFSQVLALEHRGKRYTIRLPL
VGEFQIENALVSAGLAIGTGGDAADVFASLEHLEGAKGRLERVGERNGAPIFVDYAHKPD
ALAKALQALRPYARRRLVVVFGAGGDRDAGKRPIMGAIAAGNADGIIVTDDNPRGEKPES
IRAEILAAAKGAREIGDRAAAIRTAIAELEDGDALLIAGKGHETGQIVGGEVLPFSDHEA
VAAALASRIA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcgacctcctcgatcaggacgttcagggcaatgacgccgcaatcgagccc
gcggtcgcggcgctcgacgtgaccggcgttgcgctcgacagccgcgcggtcaagccagac
gatctcttcttcgcacttgcgggcagcaagaccgacggtgcgcgctttatcgatgccgcg
attgccgcaggcgcggtggcggtcgtcggcgaccatgcgcctgacggctgcaaggtgccg
ttcatcacagttgccaatccgcgccgcgcgctggcgctagccgcggcaagattttttccc
gcgcagcctgcgacaattgcggcggtgaccggcaccagcggcaagacctcggtcgccgca
ttcacccggcagatctgggaacggctcgggcacgcctccgccagtatcggaaccatcggc
ctggtctcgccgaaacgtaccgtctacggctcgctgacgacgcccgatccgatcgcgctg
caccggcagctggacgagatcgcgcgcgagggcgtcacgcatctcgccttcgaggcctct
tctcacgggctcgaccaatatcgcctcgacggcgtgcgcgtgtccgccggcggcttcacc
aatctctcgcgcgaccacatggattaccatccgaccgtcgcgcattatctcgcggccaag
ctcaggctgttccgcgaacttgtcccgccggggggcgcggccgtgatctccgccgatcat
gattgctcggcggaggcgatcagtgctgcgaattcgcgcggcttgcgcgtgatggcagtc
ggtcgcaacggcgacggggcgggcgagggcattcgtctcgccggcgcggaggtcgaagga
ttttcgcaagtgctcgcgctcgaacatcgcggcaagcggtatacgatccggctgccgctg
gtcggcgagttccagatcgagaatgcgctggtgtcggctggcctcgccatcggcaccggc
ggcgacgccgcggacgtgttcgcgagcctcgaacatctcgaaggcgccaagggccggtta
gagcgcgtcggagagcgcaacggtgcgccgatcttcgtcgactatgcgcacaagcccgat
gcgctggcgaaggcgctgcaggcgctgcgtccctacgccaggcgcaggctggtcgtcgtg
ttcggcgccggcggcgaccgcgatgccggcaagcgtccgatcatgggcgcgatcgccgcc
ggcaacgccgacggcatcatcgtcaccgacgacaatccgcgcggcgagaagccggaatcg
atccgcgccgaaattctcgccgccgccaagggcgcccgcgaaatcggcgaccgggccgcg
gcgatccgcaccgcgatcgccgaattggaagatggcgatgcgctgctcatcgccggcaag
ggccacgagaccgggcagatcgtcggcggagaggttttgcccttcagtgatcacgaggcg
gtcgccgccgcattagcgtcgaggattgcatga
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