Bifidobacterium longum BXY01: GS08_07380 Help Entry GS08_07380        CDS       T03387                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism blx  Bifidobacterium longum BXY01 Pathway blx03030   DNA replication blx03410   Base excision repair blx03420   Nucleotide excision repair blx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:blx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GS08_07380    03410 Base excision repair     GS08_07380    03420 Nucleotide excision repair     GS08_07380    03430 Mismatch repair     GS08_07380  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:blx03032]     GS08_07380    03400 DNA repair and recombination proteins [BR:blx03400]     GS08_07380 Enzymes [BR:blx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GS08_07380 DNA replication proteins [BR:blx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GS08_07380 DNA repair and recombination proteins [BR:blx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GS08_07380    NER (nucleotide excision repair)     GGR (global genome repair) factors      GS08_07380    MMR (mismatch excision repair)     DNA ligase      GS08_07380   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GS08_07380 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 HHH PTCB-BRCT Nlig-Ia BRCT_2 Seipin Zn_Ribbon_1 Motif Other DBs NCBI-ProteinID:  AIF90929 UniProt:  A0A7U4KE45 LinkDB All DBs Position complement(1680690..1683452) Genome browser AA seq 920 aa AA seqDB search MSTNEQLAWDFDDGDVAEVRPDTGIARFAPGSEQWIAALQPTDDDAIRLDRFDVNTMTAE AAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQSPTHRV GGSFSNDFTSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVKIDGLA LNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGEVFMRW DDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWGPDHPR GTHDVVADQSQAYDLYTRWGVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHALDGIVVK VDDLGLQRALGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLKPVYVAG STVARTTLHNGFEVKRKGILIGDTVVVRKAGDVIPELVGPVLERRKGREGQLREFVMPEF CPSCGAKLAPAKEGDKDIRCPNVESCPAQLTERVISLASRKAFDIEHLGEQSAIALTNPE ENRPDSVATYAPNITEVLVAPGEEPEPYEPVEGLELPAAQKPVLSNESGLFDLTSADLRD VRVWREAAIVEVHETVDANGKKKKVRKRVGGSGLWHQVPAFWTAPTPAKKLTAKQLAERA QEEAAVESAGTQGGAASETTGAPTGAEAPLGTMPGFAAASYPEYDVPADAVIVRVDHKTT RTGVTDVPVIIRPGENTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLA AIENATIEDLTAIDGVGPEIAESVVNWFAAAREPGDWRGATLRAWQAAGVGVDEAETSSL PQTLAGKTVVVTGSLEGYSRDSAKEAIIERGGKAAGSVSKKTDYVVIGANAGSKATKAEE LGIPMLGEAQFAQLLATGTI NT seq 2763 nt NT seq  +upstreamnt  +downstreamnt atgagcacgaacgaacaactggcatgggatttcgacgatggggatgtggccgaggtccgg cctgataccggtattgcacgttttgcccctggctccgaacaatggatagccgcactgcag cccactgacgacgacgcgatacgcctcgaccgtttcgacgtgaacacgatgaccgctgag gccgccgcccgcctgtgggctcgcgtggccgcatgggtggaatccgatcagatcgcctac tacatcgacgactcacccgtcagctccgacgccgcctacgacgcgcgcatgcgttgcctc gaacgactcgaagcggcgttcccctcattggacaatccgcagtcgcccacccatcgcgtc ggcggctccttctccaacgacttcacctccgtgcgccaccccagccgcatgatgagcctt gacgacgtcttctccatcgaagaactcaaggattggtacgactcggtgattcgcgacctc gattggcccgaatccaagcccctgcccatgagctgcgaggtcaaaatcgacggcctcgcc ctgaacctcatctatcgcaacggcgtgcttgaacagggcctgacgcgcggcgacggcgtt accggcgaagacatcaccctgaatgtgcgaaccatcggctccattcccgccaacctcggc ggccccaaggaagacgttccggacttcgtggaaatccgaggcgaagtgttcatgcgctgg gatgacttccacaccctgaacaacgagcaggaggacgccggacgagcgccctttgccaac ccgcgcaacgccgccgccggctcgctgcgtcaaaaagaccctcgcatcaccgccacccgt cgcctgagcttctatgcgcatggtctgggtcagctcacctgggggccggaccatccgcgc ggcacccatgacgtggtcgccgaccagtcgcaggcctacgatctatacaccaggtggggc gtgccggtctccccgcataatcgtgcggtgacctcattccaggagatcctggacatgatc gagtactacggcgagcatcgcggcgacatcgagcacgcgctcgacggcattgtcgtcaag gtcgatgacctgggcctgcagcgcgccctcggtgccacctcgcgcgcgccgcgctgggcc atcgcctacaaatacccgcccgaagaggtcaacaccgaactgctcaacatcaccgtgcag gtggggcgtaccggccgtgtgacgccggtcgccgtgctcaaacctgtctacgtggccggc tccaccgtggctcgtaccacgctgcacaacggatttgaagtcaaacgcaagggcatcctg atcggcgacaccgtggtggtgcgcaaggccggcgatgtgattcccgaactggtcggcccg gtgcttgaacggcgcaaagggcgtgagggccagctgcgcgaattcgtcatgcccgagttc tgcccttcatgcggcgcgaaactggcacccgccaaggagggtgacaaggacatccgctgc ccgaatgtggaaagctgcccggcccagttgaccgagcgcgtgatttcgctggcctcacgc aaggcgttcgacatcgagcatctgggtgaacagtcggccatcgctctgaccaacccggag gagaaccggcctgattcggtggcgacctacgcgccgaacatcactgaggttctggtcgcc cccggcgaagagcccgaaccgtacgagccggtggaggggctggaattgccggccgcgcag aagccggtgttgtctaacgaatccgggttgttcgacctgacctccgccgatctgcgcgac gtgcgtgtgtggcgtgaggccgcaatcgtcgaagtgcatgagacggtcgatgcgaacggt aagaagaaaaaggtgcgtaagcgtgtcggcggctctggcctgtggcatcaggtgcctgcc ttctggaccgcgcccacgccggccaagaagcttacggccaagcagttggccgaacgcgcg caagaagaggccgcagtcgaatctgccggaacacagggaggtgccgccagcgagacgacc ggcgcacctaccggggctgaggctccacttggtactatgccgggctttgccgcagcctcc tatcccgagtatgacgtgccggccgacgcggtcatcgtgcgcgtggaccacaagaccacg cgcaccggcgtcacggatgtgccggtgatcattcggcccggcgaaaacacgcgcaagatg ttcgacgaaatggacaaggcccgtcacgccgacctgtggcgtgtgctggtcgcgttgtcg attcgccggctcggtccgcctaccgcacgcctgatcgcctcggcgatgggctcgctggca gccatcgaaaacgccacgattgaagatctgacggccatcgacggggtgggcccggaaatc gccgaatcggtggtgaactggttcgccgccgcccgcgagcccggcgactggcgcggcgcg actttgcgtgcttggcaggccgccggcgtgggcgtcgacgaggccgagaccagttcgctg ccgcagacgctggccggcaaaaccgtggtggtcaccggttctctggagggctattcgcgc gactccgccaaagaggcgattatcgagcgcggcggcaaggcggccggttcggtgagcaag aagaccgattacgtggtgatcggcgcaaacgccggctccaaggccaccaaggctgaggaa ctcggcatccccatgctgggcgaagcccaattcgcccagctcctagccaccggcaccatc taa

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