Bermanella marisrubri: HF888_08745
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Entry
HF888_08745 CDS
T06527
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF888_08745 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmar03400
]
HF888_08745 (nth)
Enzymes [BR:
bmar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HF888_08745 (nth)
DNA repair and recombination proteins [BR:
bmar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF888_08745 (nth)
Prokaryotic type
HF888_08745 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIZ84313
LinkDB
All DBs
Position
1899707..1900342
Genome browser
AA seq
211 aa
AA seq
DB search
MNKDKRTEIFTRLRDNNPQPETELEYSSPFELLVAVTLSAQATDVSVNKATRKLFPVANT
PESIYALGEEGLKEYIKTIGLFNSKAKNVVAMCKILMEKHNSQVPETRDELVALPGVGRK
TANVVLNTAFNQIAMAVDTHIFRVSNRTKIAPGKDVLEVEKRLIRLVPKEFLMDAHHWLI
LHGRYVCTARKPKCGSCTIEDLCEFKEKILD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagataaacgcactgaaatctttacacgcttaagagacaacaaccctcagccg
gaaacggagctggaatacagctcccctttcgagttattggttgccgtcacgctatcagca
caagccaccgacgttagcgtcaacaaagccacgcgaaaattattccctgtcgccaatact
ccagaaagtatttacgcgttaggtgaagaaggtttaaaggaatacatcaaaaccattggc
ctatttaacagcaaagccaaaaacgtggtagccatgtgcaaaatcctaatggaaaagcac
aactctcaagttccagaaacacgagacgaattagtggcactgcccggcgtcggacgaaaa
acggctaacgtggtgctaaataccgcctttaatcaaattgcaatggcagtggacacacac
atcttccgtgtcagcaatcgaaccaaaattgcaccaggcaaagatgtactagaagtggaa
aagcgtttgattcgcctagtaccaaaagaattcctcatggacgcccaccattggcttata
ttacatggccgctatgtttgcaccgcacgcaaacccaaatgtggttcttgcactattgaa
gatttgtgtgaatttaaagaaaagattttagattag
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