Botrimarina mediterranea: Spa11_27100
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Entry
Spa11_27100 CDS
T09862
Symbol
bepF_1
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bmei
Botrimarina mediterranea
Pathway
bmei01501
beta-Lactam resistance
bmei01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spa11_27100 (bepF_1)
01503 Cationic antimicrobial peptide (CAMP) resistance
Spa11_27100 (bepF_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmei03036
]
Spa11_27100 (bepF_1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmei02000
]
Spa11_27100 (bepF_1)
01504 Antimicrobial resistance genes [BR:
bmei01504
]
Spa11_27100 (bepF_1)
Chromosome and associated proteins [BR:
bmei03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Spa11_27100 (bepF_1)
Transporters [BR:
bmei02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Spa11_27100 (bepF_1)
Antimicrobial resistance genes [BR:
bmei01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Spa11_27100 (bepF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CDC45
WEMBL
Nop14
RPA43_OB
Motif
Other DBs
NCBI-ProteinID:
QDV74506
UniProt:
A0A518K9N4
LinkDB
All DBs
Position
3427468..3428772
Genome browser
AA seq
434 aa
AA seq
DB search
MSPTAMRALAAALTLLATHGCHKPAGEHAHAEGHHHPTHALVVTSPALRDVISTQQYVCQ
IHSCRHIEVCALESGYIEPIHVREGQTVQKGDLLFKILPTLYQARYESEVAEAQVAQLEF
NNTKKLYEDNVVSQNELALSQARLAKAVAQMGLAQAELNFTDVRAPFNGIIDRLMRQQGS
LVEEGDVLTTLSDNRVMWAYFNVPESRYLEYMANLKTQPDKLQIGLVLANGKRFEQAGAI
GAIEADFDNETGNIAFRADFANPEQLLRHGQTGTVLVSRSTPGAVVIPQRATFEVLAKNY
VYVVEDSVGADHDRQADAHVSTYDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEERHS
HKSHDSRHLAQGVVRQREIVIDSEQDDIFLIKKGLNAGDKIVFEGVRQVRDGDTIEYEYR
APEVVLQNLKFKAE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccaccgcgatgcgcgccctagctgctgcgctgacgctcctcgctactcacggg
tgccataaacccgctggcgagcacgcccatgcggagggacatcaccacccgacgcacgcc
ctggtcgtcaccagccccgcacttcgcgacgtcatcagcacgcagcagtacgtctgccag
atccactcctgccgacacatcgaggtctgtgctctagagagcggctacatcgaaccgatc
catgtccgcgaaggccagaccgtgcagaagggcgacctgctcttcaagattctgcccacg
ctctatcaggcccggtacgagtccgaggtagccgaggcgcaggtggcgcagctcgagttc
aacaacaccaagaagctctacgaggacaacgtcgtctcgcagaacgagctagccctctcc
caagcgcggctggcgaaggcggtcgctcagatgggcttggcgcaagccgagctgaacttc
accgacgtcagggcgcccttcaacggcatcatcgaccgcttgatgcgtcagcagggaagc
ctcgtcgaagaaggcgatgtcctcacaacgctttccgacaacagagtgatgtgggcttac
ttcaacgtgcccgagtcgcgttacctcgagtatatggccaatctcaagacccagcccgac
aaactacagatcgggttggtgctggcgaacgggaagcggttcgagcaagccggcgccatc
ggcgcgatcgaggccgacttcgacaacgagaccggcaacatcgccttccgcgccgacttc
gccaaccccgaacaactactgaggcacggccaaacgggcacggtgctcgtcagccgatcg
acgcctggcgccgtggtgattccgcagcgagccacctttgaggtcctggcgaagaattat
gtctacgtcgtcgaagacagtgtcggcgccgatcatgatcgccaagccgacgcccatgta
tcgacgtacgacgacgacgacgacgacgacgacgacgacgacgatgacgatgatgacgac
gatgacgacgatgacgacgatgatgatgacgacgatgacgacgatgaggaacgacacagc
cacaagagccacgattcccgtcacctcgcacaaggtgtggttcgccaacgcgaaatcgtc
atcgatagcgagcaggacgacatcttcctgatcaagaaagggctgaacgccggcgacaag
atcgtctttgagggagtccgtcaggtccgcgacggcgacacgatcgagtacgagtaccgt
gctcccgaggtcgtgctgcaaaacctcaagttcaaggcagagtag
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