Burkholderia multivorans ATCC 17616 (Tohoku): BMULJ_01995
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Entry
BMULJ_01995 CDS
T00740
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bmj
Burkholderia multivorans ATCC 17616 (Tohoku)
Pathway
bmj03030
DNA replication
bmj03410
Base excision repair
bmj03420
Nucleotide excision repair
bmj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMULJ_01995 (ligA)
03410 Base excision repair
BMULJ_01995 (ligA)
03420 Nucleotide excision repair
BMULJ_01995 (ligA)
03430 Mismatch repair
BMULJ_01995 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmj03032
]
BMULJ_01995 (ligA)
03400 DNA repair and recombination proteins [BR:
bmj03400
]
BMULJ_01995 (ligA)
Enzymes [BR:
bmj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BMULJ_01995 (ligA)
DNA replication proteins [BR:
bmj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BMULJ_01995 (ligA)
DNA repair and recombination proteins [BR:
bmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BMULJ_01995 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMULJ_01995 (ligA)
MMR (mismatch excision repair)
DNA ligase
BMULJ_01995 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMULJ_01995 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
Nlig-Ia
MctB
BRCT_2
5_3_exonuc
DUF4874
Motif
Other DBs
NCBI-ProteinID:
BAG43912
UniProt:
A9AIK9
LinkDB
All DBs
Position
1:complement(2144450..2146525)
Genome browser
AA seq
691 aa
AA seq
DB search
MARTQAEPPASQPDVRAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLESDHPD
LVTPDSPTQRVGGAVASGFTPVVHDAPMLSLNNGFADDDIVAFDKRVADALGKTTDLAGS
VTDPVEYACELKFDGLAISLRYEHGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGDR
VPAVLDVRGEVLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFF
AYGIGVLDGMPMPDTHSALLDWYEALGLPVNRERAVVYGAQGLLDFFRKVGEKRESLPYD
IDGVVYKVNRRDEQDRLGFVSRAPRFALAHKFPAQEALTKLVAIGVQVGRTGAITPVARL
EPVFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGAVLDRRPADAAEFV
MPTECPVCGSKIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLV
ELNLVRTPADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGES
TAKDLAKHFGSLDPIMNATIDELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVT
WPEGPPAPKAPQGVLAGKTVVLTGTLPNLTRDDAKEMLEAAGAKVAGSVSKKTDYVIAGA
EAGSKLAKAEALGIPVLDEDGLHQLLEGNTR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaacccaagccgaaccgccagccagtcaacccgatgtgcgcgccgcctggctg
cgcgaccagctcgaacgcgcgaactacgcgtactacgtgctcgatcagcccgatctgccc
gatgcggaatacgatcggctgttccgcgagctgcagcagctcgaatccgatcatcccgat
ctcgtcacgcccgattcgccgacgcagcgcgtcggcggcgccgtcgcgagcggcttcacg
ccggtcgttcacgatgcgccgatgctgtcgctgaacaacgggttcgccgacgacgacatc
gtcgcgttcgacaagcgcgtcgccgacgcgctcggcaagacgaccgatctcgccggctcg
gtgacggatcccgtcgaatacgcgtgcgagctgaagttcgacgggctcgcgatttcgctg
cgctacgagcacggcgtgttcgtgcaggcgtcgacgcgcggcgatggcacgaccggcgag
gacgtgaccgaaaacgtccgcacgatccgctcgattccgctgaagctgaagggcgaccgc
gtgccggccgtgctcgacgtgcgcggcgaggtgctgatgttcaagcgcgattttgcgcgc
ctgaacgaacgccagcgcgcggccgagcagcgcgagttcgcgaacccgcgcaacgcggcg
gccggcagcctgcgccagctcgatccgaagatcaccgcgcagcgtccgctctcgttcttc
gcgtacggcatcggcgtgctcgacgggatgccgatgcccgatacgcacagcgcgctgctc
gactggtacgaggcgctcgggctgccggtgaaccgcgagcgcgcggtcgtgtacggcgcg
caggggctgctcgacttcttccgcaaggtcggcgagaagcgcgagtcgctgccgtacgac
atcgacggcgtcgtgtacaaggtgaaccgccgcgacgagcaggatcgcctcggtttcgtg
tcgcgcgcgccgcgcttcgcgctcgcacacaaattccccgcgcaggaggcgctgacgaag
ctggtcgccatcggcgtgcaggtcggccgcaccggcgcgatcacgccggtcgcgcggctc
gagcccgtgttcgtcggcggcgcgaccgtcacgaacgcgacgctgcacaacgaggacgag
gtgcgccgtaaggacatccggatcggcgatacggtgatcgtgcggcgcgcgggcgacgtg
attccggaggtggtgggcgccgtgctcgaccggcgtccggccgacgcggccgaattcgtg
atgccgaccgaatgcccggtatgcggctcgaagatcgagcggctgcccgacgaggcgatc
gcgcgctgcacgggcgggctgttttgccccgcgcagcgcaagcaggcgctgtggcatttc
gcgcagcggcgcgcgctcgacatcgacgggctcggcgagaagatcatcgaccagctcgtg
gagctgaacctcgtacgcacgccggccgatctgttcaacctcggcttcgcgacgctcgcg
gagctcgaccgcttcgcggagaaatcggcgcagaatctgctcgactcgctcgagaaggcg
aagcacacgacgctcgcgcgcttcatttacgcgctcggcatccgccatgtcggcgaatcg
accgcgaaggatctcgccaagcatttcggctcgctcgacccgatcatgaacgcgacgatc
gacgagctgctcgaagtgaacgacgtcgggccgatcgtcgccgaatcgatccaccagttc
ttcgcggaagagcacaaccggaccgtgatcgagcagctgcgcgcgccgggcaaggtcacc
tggccggaagggccgcccgcgccgaaggcgccgcagggcgtgctcgccggcaagacggtc
gtgctgaccggcacgctgccgaacctcacgcgcgacgacgcgaaggagatgctcgaggcg
gcgggcgcgaaggtggccggctcggtgtcgaagaagaccgattacgtgatcgcgggcgcc
gaagccggcagcaagctcgcgaaggccgaagcgctcggcattccggtgctcgacgaagac
gggctgcatcaactcctggagggcaacacgcgatga
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