Blattabacterium sp. (Mastotermes darwiniensis): MADAR_066
Help
Entry
MADAR_066 CDS
T01642
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bmm
Blattabacterium sp. (Mastotermes darwiniensis)
Pathway
bmm03030
DNA replication
bmm03410
Base excision repair
bmm03420
Nucleotide excision repair
bmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MADAR_066 (ligA)
03410 Base excision repair
MADAR_066 (ligA)
03420 Nucleotide excision repair
MADAR_066 (ligA)
03430 Mismatch repair
MADAR_066 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmm03032
]
MADAR_066 (ligA)
03400 DNA repair and recombination proteins [BR:
bmm03400
]
MADAR_066 (ligA)
Enzymes [BR:
bmm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MADAR_066 (ligA)
DNA replication proteins [BR:
bmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MADAR_066 (ligA)
DNA repair and recombination proteins [BR:
bmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MADAR_066 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MADAR_066 (ligA)
MMR (mismatch excision repair)
DNA ligase
MADAR_066 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MADAR_066 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
HHH
BRCT_2
TackOD1
DNA_ligase_ZBD
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AER40388
UniProt:
G7SQW9
LinkDB
All DBs
Position
complement(75039..77057)
Genome browser
AA seq
672 aa
AA seq
DB search
MEHQKKNIKKKIYRLRKELLKYNYQYYTLDTSHVSDYDFDKKLRELSLLEKEHPELYDPT
SPTIRIGEIIYKKNNRSTIIRHGYKMYSLQNTYFKKELMDWIKKIHKYSSSSFVCELKYD
GVSINLIYKNGFLIHAVTRGDGKKGENVTANVRTIQSIPIKLSGENHPTDLEIRGEIFIS
IKKFIKINTERKKQGKKPYSNPRNTASGIIKIKDTKEVDKRNLSCIVYSVIGKNLPFDTQ
YQSLKYLQKWGFKVPEYAVLCKREKDIFHFMNYWNRWKHLLPYHIDGIVIKVNEYQKQTL
LGYTNKYPRWAIAYKFRQKKLSETKLLNLKFQVGRTGIITPVAHVIPTKITGTIVKRVSL
YNNRFIQKMNLHYGDYLLLEKGGDVIPKVTKVNVKKRLMNATPIDFIKACPSCHSFLIKE
KELFYCKNRKCPSQIKEKIQHFVSAMNIQSIGKKIINRLYKNGFLYSIYDLYRLKKEEII
KIDGVKEKLADSMIKNIEQSKNHSYHRVLYGLGIPHVGEQMAKRLTEIFTNVKDLMNADS
NILTSISGIGKKIANSIKTYFSIIENKTMVERLIEQGLNFYKKSSRIKSMIEGKSFVFTG
KLSCMTRHTAKNMIELLGGRVFNTVNNKINFIVVGKNFGSKLEKGMNKNNVQILNEDVFI
DLIEKAKKEIKL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaaaaaaaaaacattaaaaaaaaaatatatcgtttaagaaaagaattattg
aaatataattatcaatattatacactggatacttctcatgtatccgattacgattttgat
aaaaaattaagagaattgtctctattagagaaagaacatccagaattatacgatcctaca
tctcccacaatcagaatcggtgaaatcatttataaaaaaaataatagatctacaataatt
cgtcatggatataaaatgtactcccttcaaaatacctatttcaagaaagaattgatggat
tggataaaaaaaattcataaatattcttcttcttctttcgtctgcgaactaaaatatgat
ggagtatccattaatttaatttataaaaatgggttcttgatccatgcggtgactcgtgga
gatggaaaaaaaggggaaaatgtgacagcaaacgtacgaaccatacaatccattcccata
aaattaagtggagaaaaccatcctacggatcttgaaataaggggagaaatttttatttct
ataaaaaaatttataaaaataaatacagaaagaaaaaaacaaggaaaaaaaccttattcc
aatccaagaaatacggctagtggaatcataaaaattaaagatacaaaagaagtagacaaa
agaaatctatcttgtattgtatactcggttataggaaaaaatcttccttttgatacgcaa
tatcaatctctcaaatatctacaaaaatggggatttaaagttcccgaatatgctgtcctt
tgtaaaagggaaaaggatatatttcatttcatgaactattggaatcgatggaaacatctc
cttccttaccatatcgatggcatagtaattaaggtcaatgaataccaaaaacaaaccctt
ttaggatacacgaataaatatcctcgttgggccattgcttataaatttagacaaaaaaaa
ttatcggaaacaaaattattaaatctaaaatttcaagtaggacgtactggaatcattact
cctgtagctcatgttattcctaccaaaattactggaaccatagtgaaaagagtttcgctt
tataacaatcgttttatccaaaaaatgaaccttcattatggggattatcttctattggaa
aaaggaggagatgttattccaaaagtgacaaaagtaaatgttaaaaaacgattaatgaat
gccactcctatagatttcatcaaagcatgtccatcatgtcatagttttttaataaaagag
aaagaattattctactgtaaaaatagaaaatgtccttctcaaatcaaagaaaaaatacaa
cattttgtaagtgcaatgaatatacaatctattggaaaaaaaatcattaatcgattatac
aaaaatggttttttatacagtatttacgatttatatcgattaaaaaaggaagaaattatt
aaaatagatggagtgaaagaaaaattagcagatagtatgataaaaaatattgaacaatcc
aaaaaccattcttatcatagagttctatatggattaggtattcctcatgtaggagaacag
atggctaaaaggttaacagaaatttttacgaatgtaaaagatttaatgaatgcggattcc
aatattctaacatctatttcaggaataggaaaaaagatagcaaacagtataaaaacttat
ttctcaattatagaaaacaaaacaatggtggaaagacttatagaacagggattaaatttt
tacaaaaaatcttccaggattaaaagcatgattgaaggaaaatcttttgtattcacagga
aaactatcttgtatgactcgtcatacagctaaaaatatgatagaacttttaggtgggaga
gtatttaatactgtgaataataaaattaatttcattgttgttggaaaaaactttggttca
aaattagaaaaaggaatgaataaaaataatgtacaaattttgaatgaagatgtttttata
gatctcattgaaaaggctaaaaaagaaataaaactttaa
DBGET
integrated database retrieval system
