Bombyx mori (domestic silkworm): 101736447
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Entry
101736447 CDS
T02817
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101736447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101736447
Spliceosome [BR:
bmor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101736447
Complex C
U5 SnRNP specific factors
101736447
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
101736447
NCBI-ProteinID:
XP_004928683
UniProt:
A0A8R1WP07
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All DBs
Position
15:complement(1474141..1486602)
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AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSEDEQSVYGQDNREGDEEAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKHKKFQVQEQQLPETTYDMEYMA
DMLDNTNLIRNITLMGHLHNGKTSFVDCLMRQTHPGTINNETTIPIRYTDTLFVEQERGV
SIKSMPVTLLLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERMLRHAVQERIHLTLCINKIDRLMLELKLPPADAYYKLRHIIDELNSMLETNQPQDNPD
EPPIVFSPLLGNVCFASTLYDVCFSLESFAAMYAASYPACGLRASDMAGWLWGDVYFNAK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLTELGIKLTKQEAKLNV
RPLLRLVCSRFFGDFCGFVEMAVRHVPSPLDAAARKVAHCYRGAGGELRQDMLHCDQSAR
LVAHTTKMYPTDDCGFFLVLARIMSGTLYAGQTVRVLGENYSSQDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGIDQPIVKTCTVVSAEEDCELHTFTPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIETGAVCVSWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLH
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacggagatttatatgacgaatttggaaactacatcgggccagacttggagtctgat
tctgaagacgaacagagtgtatatggtcaggataatcgtgaaggtgatgaggaagcaatg
gaggaggacgaggacgcagacgcggagcccgaagttgcgcctatgtccgtcgttcttcat
gaggacaaacgttactatcctcaagctgtagaagtgtatggacccgacgtagagacagtc
gtccaagaagaagatacacaggctctcgacaaacccctggtagagcctgtgaaacacaag
aagttccaggttcaagaacagcagctaccagagaccacctacgacatggagtacatggct
gacatgttagataatactaacttaatcagaaatattacgttaatgggccacttgcacaat
ggaaaaacatcttttgtagactgtctcatgagacagacacatcctggaacaattaacaat
gagacaacaatacctataaggtatacagatactctgtttgtggagcaagagcgaggagtg
tcgataaagtccatgccggtaacattgctattgaaggatataaagggaaagtcacattta
ttgaatatcatggatactccaggtcacgtgaacttcagtgatgaggtgactgctgctttg
cggatatcggatggagcggtactctttgtggacgctgctgaaggtataatgctcaacacg
gagcgaatgttacgtcatgcagtacaagaaagaattcatttaactctttgcatcaacaaa
atagacaggctaatgcttgagctaaaattacctcctgcagatgcctattataagctcagg
catattattgatgagctgaattctatgctggagaccaatcaacctcaggataatcctgat
gagcctccaattgtattttcaccacttctgggtaatgtctgcttcgcgtcaacattgtac
gacgtgtgtttctctctggaatcgtttgcggcgatgtacgctgcctcgtaccctgcgtgc
ggactgcgggcatccgacatggcgggctggctgtggggcgatgtctacttcaacgcgaag
actagacgcttcacgaagaaacaacctcatgcctctgctcagagaagcttcgtggagttc
atattggagccgctgtacaagatttttgctcaagtggtgggagacgtggacgacaccctg
ccagctgtgctcacagaactcggtataaagttaacgaagcaggaagccaaactgaacgtg
cgtccgctactccgcctcgtgtgcagcaggttcttcggcgacttctgcgggttcgtggag
atggcggtccggcacgtgccgtccccactggacgcggcggcgcgcaaggtggcgcactgc
taccgcggcgccggcggggagctgcgtcaagacatgctgcactgcgaccagtccgcgcgg
ctcgtggcgcacaccaccaagatgtaccccaccgacgactgcggcttcttcctggtactg
gcgcgtatcatgagcgggacgctgtacgccggacagaccgtgcgagtcctgggtgaaaac
tacagctcccaggatgaagaggactccaggatcatgaacgtcggaaggctctggatatat
gaggctagatataaagtggaactgaaccgcgtacctgccgggtgctgggccctcatagaa
ggcatcgaccagccgatagtgaagacgtgcaccgtcgtgtcggcggaggaggactgcgag
ctgcacacgttcactccgctccggttcaacactcaagccgtcgtcaagatagccgtcgag
ccggtcaacccctcggagctacccaagatgctggatgggctgagaaaggtaaataagtcg
tatccactactgtcgacccgggtggaggagtcaggggaacacgtgatattgggaaccggt
gaactatatttggactgcgtgatgcacgatctgaggaatatgtactccgagattgatatc
aaagttgctgatccagtcgtgtcgttctgcgaaactgtagtcgagacgtcgtcgttgaaa
tgcttcgccgagactccgaacaagaggaacaaactgacgatgatcgccgaacctctggag
cggggtctcgccgaggacatagagacgggcgcggtctgcgtgtcctgggacaggaagagg
ctaggagaattcttccagacgaaatacgattgggatcttctggctgcccgttcgatttgg
gccttcggtcccgacacgatgggacccaacattctagtcgatgacactctaccctccgaa
gtggacaagcatctcctggcttcggtcaaggatagcattgttcaaggcttccagtggggt
acgcgggaagggccgctctgtgaggagcccatcaggaacgtgaaattcaagatcctggat
gctgtcatcgcgcaggagccgctgcaccggggcggcggacagatcatccccacggcgcga
cgcgtggcgtattcagcatttctaatggcgacccctcgtctgatggagccgtatctgttt
gttgaggtgcaagcgccggccgactgcgtatccgccgtctacacggtgctggctaagagg
agaggtcacgtgacccaggacgctccggtccccgggtcgccgctctacaccatcaaagcg
ttcgtcccggccatagactcgttcggcttcgagaccgacctgcgcacgcacacgcagggc
caggccttctgtctgcaggtcttccatcactggcagatcgtgcccggcgacccgctcgac
aagagtattgttatcaggccattggaaccacagccagcgacgcatttagccagagagttc
atgatcaagacccgtcgacgcaaggggctcagtgaggacgtgtccatcaataagtttttc
gacgatcctatgttgttggagctggcaagacaagacgtacaacttcattaa
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