Bombyx mori (domestic silkworm): 101737436
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Entry
101737436 CDS
T02817
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101737436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101737436
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101737436
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GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
RBD_AKAP-17A
SET1_RBD
RRM_11
Motif
Other DBs
NCBI-GeneID:
101737436
NCBI-ProteinID:
XP_004924823
UniProt:
A0A8R1WIN6
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Position
10:complement(8091883..8099860)
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AA seq
411 aa
AA seq
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MSFEYLPVAEDENEEPIELPIEEDGALMLSTVSAQFPGCCGLKYRHPETKTIRGIRLRDG
RLYPPPEGWGNYLYICSFPKENKRKLGENSESTIMRHKRNDTLCSDLIVLGLPWKATEQT
VREYFEKFGEVLMAQLKRDPKTGMSKGFAFIRFASYTSQMRVLAQRHMIDGRWCDVRIPN
SKEGSIPSMPCKVFVGRCTEELSANDLREYFSQFGEVTDVFIPKPFRAFSFITFLDPEVA
QSLCGQDHIIKGVSVNVSNASPKQNKSGTNQRAMPSRSYDEGHPHNVSNNNSWSNRNMDM
VNMQALGMSGQHGQTAVAGGGGQAQGGSMPIGMGGLPVNQALVAAALNQAAGWGLINNIP
SGASEQGAFAGPASSAPPAPPNFLSWMQQGNSAQGPSSQWGQRHQSQGHSV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgagtatttgcccgttgctgaagacgaaaatgaagaacccatagaactgcct
atcgaagaagatggagctttgatgctatcgactgtgtctgcacagtttccaggttgctgc
ggattgaaatatcgacaccctgaaacgaaaaccatcaggggaattcgactaagagatggt
cgactatatcctcctccagaaggatggggaaattatttgtatatatgtagttttcctaaa
gaaaataaacgcaaacttggtgaaaattccgagtccacaattatgagacataaaagaaat
gacaccttatgttcggacctgatagttttgggactcccttggaaagccacagagcagaca
gtgcgagaatattttgaaaaatttggtgaagtattaatggctcagctgaaaagagaccca
aaaacgggaatgtctaaaggtttcgcttttattcgatttgcatcttatacatcccaaatg
agagttcttgctcaaaggcacatgattgatgggaggtggtgtgatgtaaggataccaaat
tccaaagaaggatctataccatctatgccttgtaaagtttttgttggccgctgtactgaa
gaattatctgccaatgacttgagagagtatttttctcaatttggagaagttactgatgtg
ttcatcccaaaaccatttagggcattcagttttataacatttcttgacccagaagttgcg
cagagtctatgtgggcaagaccatataataaaaggtgtttctgttaatgtttcgaatgca
tctccaaagcaaaacaaaagtggtacaaaccaacgtgccatgcctagtagaagttatgat
gaaggtcatccacacaatgtgtctaataataattcttggagcaaccgaaacatggatatg
gttaatatgcaagcacttggtatgtctggtcaacatggacaaacagctgtagctggtggt
ggaggacaagcacaaggtggcagtatgcctataggaatgggaggactacctgtaaatcaa
gctttagtagcagcagctcttaaccaggcagctggttggggtcttatcaacaacatccct
tcaggtgcatcagaacaaggtgcctttgctggtccagcatcatcggcacctccagcacca
ccaaacttcctgtcttggatgcaacaaggtaattcagcacaaggaccctctagtcagtgg
ggacaaagacatcagtcccaaggccactctgtctga
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