KEGG   Bombyx mori (domestic silkworm): 101737436
Entry
101737436         CDS       T02817                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101737436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmor03019]
    101737436
Messenger RNA biogenesis [BR:bmor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     101737436
SSDB
Motif
Pfam: TDP-43_N RRM_1 RRM_PARP14_3 RRM_7 Nup35_RRM_2 RBD_AKAP-17A SET1_RBD RRM_11
Other DBs
NCBI-GeneID: 101737436
NCBI-ProteinID: XP_004924823
UniProt: A0A8R1WIN6
LinkDB
Position
10:complement(8091883..8099860)
AA seq 411 aa
MSFEYLPVAEDENEEPIELPIEEDGALMLSTVSAQFPGCCGLKYRHPETKTIRGIRLRDG
RLYPPPEGWGNYLYICSFPKENKRKLGENSESTIMRHKRNDTLCSDLIVLGLPWKATEQT
VREYFEKFGEVLMAQLKRDPKTGMSKGFAFIRFASYTSQMRVLAQRHMIDGRWCDVRIPN
SKEGSIPSMPCKVFVGRCTEELSANDLREYFSQFGEVTDVFIPKPFRAFSFITFLDPEVA
QSLCGQDHIIKGVSVNVSNASPKQNKSGTNQRAMPSRSYDEGHPHNVSNNNSWSNRNMDM
VNMQALGMSGQHGQTAVAGGGGQAQGGSMPIGMGGLPVNQALVAAALNQAAGWGLINNIP
SGASEQGAFAGPASSAPPAPPNFLSWMQQGNSAQGPSSQWGQRHQSQGHSV
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgtctttcgagtatttgcccgttgctgaagacgaaaatgaagaacccatagaactgcct
atcgaagaagatggagctttgatgctatcgactgtgtctgcacagtttccaggttgctgc
ggattgaaatatcgacaccctgaaacgaaaaccatcaggggaattcgactaagagatggt
cgactatatcctcctccagaaggatggggaaattatttgtatatatgtagttttcctaaa
gaaaataaacgcaaacttggtgaaaattccgagtccacaattatgagacataaaagaaat
gacaccttatgttcggacctgatagttttgggactcccttggaaagccacagagcagaca
gtgcgagaatattttgaaaaatttggtgaagtattaatggctcagctgaaaagagaccca
aaaacgggaatgtctaaaggtttcgcttttattcgatttgcatcttatacatcccaaatg
agagttcttgctcaaaggcacatgattgatgggaggtggtgtgatgtaaggataccaaat
tccaaagaaggatctataccatctatgccttgtaaagtttttgttggccgctgtactgaa
gaattatctgccaatgacttgagagagtatttttctcaatttggagaagttactgatgtg
ttcatcccaaaaccatttagggcattcagttttataacatttcttgacccagaagttgcg
cagagtctatgtgggcaagaccatataataaaaggtgtttctgttaatgtttcgaatgca
tctccaaagcaaaacaaaagtggtacaaaccaacgtgccatgcctagtagaagttatgat
gaaggtcatccacacaatgtgtctaataataattcttggagcaaccgaaacatggatatg
gttaatatgcaagcacttggtatgtctggtcaacatggacaaacagctgtagctggtggt
ggaggacaagcacaaggtggcagtatgcctataggaatgggaggactacctgtaaatcaa
gctttagtagcagcagctcttaaccaggcagctggttggggtcttatcaacaacatccct
tcaggtgcatcagaacaaggtgcctttgctggtccagcatcatcggcacctccagcacca
ccaaacttcctgtcttggatgcaacaaggtaattcagcacaaggaccctctagtcagtgg
ggacaaagacatcagtcccaaggccactctgtctga

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