Balaenoptera musculus (blue whale): 118884025
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Entry
118884025 CDS
T09887
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118884025 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118884025 (LIG4)
Enzymes [BR:
bmus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118884025 (LIG4)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118884025 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
118884025
NCBI-ProteinID:
XP_036687228
UniProt:
A0A8B8VQQ3
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All DBs
Position
18:complement(75559687..75567190)
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRNFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSIANNNAAQRKDLVKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLATIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNTFKTDVQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTNSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNAGEQTPREMGPVIADLEHRYSWDNTPLSMFRHHTVYLDLYTVINDLNTKFEGTRLAI
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
SELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaactttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatattgaattgcttaacttacct
cgagaaggaaaagatgccctcaaacttctaaactacagaacacctaccggaactcgtgga
gatgctggagactttgcgatgattgcgtactttgtgttgaaacccagatgtttacagaag
ggaagtttaaccatacagcaggtaaatgacattttagactccattgccaacaataatgct
gcccaaaggaaggacctagtaaagaagagtgttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttagtcag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttgggctcagtgacatttctatc
actttattctctgcctttaaacccatgctggccactatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggtgagcgtatgcaa
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggttcttccccacaggaaggttcccttacaccgttcatccataatacattcaaa
acagatgttcaaaactgcatcctcgatggtgagatgatggcctacaaccctaatacacaa
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
caaacttgttactgtgtttttgatgtattgatggttaatgataaaaagctagggcaggag
acactgagaaagaggtatgaaattcttaatagtgtttttacgccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaggggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatgggctgatggat
gaactggacatcttaattgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaacccccttctggtgaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggccaaacactggaagccttttcataggaaagctccaccaagttgcattttatgt
ggaacagagaagccagaggtctacatcgaaccttggaattcggtcattgttcaggttaag
gccacagagatcgtccccagtgatatgtataaaactggctgcacgttgcgttttccacga
attgagaagataagagaagacaaagaatggcatgaatgtacatctctggaggacttagaa
caacttcgagggaaagcctccggaaagcttgcgtctaaacacctttatgtgggtgatgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacctaaaagcacccaacctttctaacgtaaacaaagtttctaatatatttgaa
gatgtggagttttgtgtcatgagtggaacaaacagccatccaaagcctgatctggagaac
agaatcgcagaatttggtggttacatagtccaaaatccaggcccagacacatactgtgtg
attgcagggtctgagaacattcgagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagccggagtggctgttagagtgtttagagaccaaaagctgtgtgccgtggcagcct
cgcttcatgatccacatgtgcccatcaacaaaacagcacttcgcccgggaatacgactgc
tacggggatagttactttgtcgatacagatttgaaccaactgaaggaagtgttctcggga
attaaaaatgctggtgaacagactcctagggaaatgggtcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccgtttatttg
gacttgtatactgttattaatgacttaaatactaaattcgaggggacaagattagctatc
acagccctggagcttcaatttcatggagcaaaagtagtttcctgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agtgaactacaggaggaaaatcaatatttggtttga
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