Balaenoptera musculus (blue whale): 118886603
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Entry
118886603 CDS
T09887
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118886603 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118886603 (EFTUD2)
Spliceosome [BR:
bmus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118886603 (EFTUD2)
Complex C
U5 SnRNP specific factors
118886603 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
118886603
NCBI-ProteinID:
XP_036692470
UniProt:
A0A8B8W6Y9
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All DBs
Position
20:complement(22874964..22909787)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDDDDDDDELGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKAGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgatgatgac
gacgacgatgagctaggagatcatgatgaagaccaccctgggatggaggtggtgctgcat
gaggacaagaagtactaccccacagctgaggaggtgtacggtcctgaagtggagaccata
gttcaggaggaggacacccagcctctcacagaacccattattaaaccggtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtatatgaaatggatttcttggca
gatctgatggataattcggagctcatcagaaatgtgaccctttgtggtcatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tacgaccaagatctgtgctacactgacatcctcttcacagagcaagagaggggtgttggc
atcaagagtactcctgtgacagtagtcttgccagataccaaaggaaaatcctacctcttc
aatatcatggacactccaggacacgtgaatttttctgacgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcacgccgtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccccccactgatgcttattacaagctgcgtcac
attgtagatgaggtcaacggattaataagcatgtattccactgacgagaacctaatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgctgacacctttggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaagacgcgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagcttcgtggagtttatcttggagcccctctataagatc
ctcgctcaggtcgtgggtgatgtggacaccagcctcccgaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcacatcccgtct
ccaaaggcgggcgccaagcccaagatcgagcacacctacaccggaggcgtggattccgac
ctcggcgaggccatgagcgactgtgaccctgatggtcccctgatgtgccatactaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgagtgctaagtggcacc
atccatgctgggcaacctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctccgtggccaggtaccacattgaa
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgtcgatcaaccaattgtg
aagaccgcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgttatcaagattgctgtggagccagtcaacccctctgagctg
cccaagatgctggacggcctccgcaaggtcaacaagagctatccgtccctcaccaccaag
gtggaagaatctggcgagcacgtgatcctgggtactggggagctctacctggactgtgtg
atgcacgatttgcggaagatgtactcggagatagacatcaaggtggctgaccccgttgtc
acgttttgtgagacagtcgtggaaacatcctccctcaagtgctttgctgaaactcccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgctgaggacata
gagaacgaggtggtccagatcacatggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttctcggc
tcggtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggtgggggccaaatcatccccacggccagaagagtcgtctactctgccttc
ctcatggccacccctcgtctgatggagccctactacttcgtagaggtccaggctcccgca
gattgtgtttctgctgtttatactgtcctggccagacgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccctgccatcgactct
tttggctttgagaccgatctgcggactcacacgcaggggcaggccttttccttgtctgtc
ttccaccattggcagattgtacccggtgatcctctggacaagagcattgtcatccgtccc
ttggagccgcagccagcaccccacctggcccgagaattcatgatcaaaacccgtcgtagg
aagggcctgagtgaagacgtcagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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