KEGG   Balaenoptera musculus (blue whale): 118891782
Entry
118891782         CDS       T09887                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus03015  mRNA surveillance pathway
bmus05014  Amyotrophic lateral sclerosis
bmus05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118891782
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    118891782
   05022 Pathways of neurodegeneration - multiple diseases
    118891782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmus03019]
    118891782
Messenger RNA biogenesis [BR:bmus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     118891782
SSDB
Motif
Pfam: TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 118891782
NCBI-ProteinID: XP_036701388
UniProt: A0A8B8WVN8
LinkDB
Position
1:8355482..8365937
AA seq 414 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYTGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtccgaatatattcgggtaaccgaagatgagaacgacgagcccattgaaataccatca
gaagacgatgggacagtgctgctgtccacagttacagcccagtttccaggggcatgtggg
cttcgctacaggaatccagtgtctcaatgtatgagaggggtccgtctggtagaaggcatt
ctgcacgcccctgatgctggctgggggaacctggtgtatgttgtcaactatcccaaagat
aacaaaaggaaaatggatgaaacagatgcttcatcagcagtgaaagtgaaaagagcagtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacaactgaacaggatcta
aaagaatattttagtacctttggagaagttcttatggttcaggtcaagaaagatattaaa
actggtcattcaaaagggtttggctttgttcgttttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagatggacgatggtgtgactgtaaacttccaaattct
aagcaaagcccagatgagcctttgagaagcagaaaggtgtttgttgggcgttgtacggaa
gacatgactgctgatgagttgcggcagtttttttgccagtacggagaagtggtagatgtc
ttcattcccaaaccgttcagggcttttgcctttgttacgtttgcagatgatcaggttgcc
caatctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaaacacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggatttggtaacagtagagggggtggagctggtttggga
aacaatcaaggtagtaatatgggcggagggatgaactttggtgcttttagcattaatcca
gcaatgatggctgcagcccaggcagctctgcagagcagctggggtatgatgggcatgtta
gccagtcagcagaaccagtcaggcccatcgggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcttttggttctggaaataactcttatactggttctaattcaggt
gcagcaattggttggggatcagcatcaaatgcagggtcaggcagtggttttaatggaggc
tttggctcaagtatggattctaaatcttctggctggggaatgtag

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