Balaenoptera musculus (blue whale): 118891782
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Entry
118891782 CDS
T09887
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03015
mRNA surveillance pathway
bmus05014
Amyotrophic lateral sclerosis
bmus05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118891782
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118891782
05022 Pathways of neurodegeneration - multiple diseases
118891782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118891782
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
118891782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
118891782
NCBI-ProteinID:
XP_036701388
UniProt:
A0A8B8WVN8
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Position
1:8355482..8365937
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AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYTGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatatattcgggtaaccgaagatgagaacgacgagcccattgaaataccatca
gaagacgatgggacagtgctgctgtccacagttacagcccagtttccaggggcatgtggg
cttcgctacaggaatccagtgtctcaatgtatgagaggggtccgtctggtagaaggcatt
ctgcacgcccctgatgctggctgggggaacctggtgtatgttgtcaactatcccaaagat
aacaaaaggaaaatggatgaaacagatgcttcatcagcagtgaaagtgaaaagagcagtc
cagaaaacatctgatttaatagtgttgggtctcccatggaaaacaactgaacaggatcta
aaagaatattttagtacctttggagaagttcttatggttcaggtcaagaaagatattaaa
actggtcattcaaaagggtttggctttgttcgttttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagatggacgatggtgtgactgtaaacttccaaattct
aagcaaagcccagatgagcctttgagaagcagaaaggtgtttgttgggcgttgtacggaa
gacatgactgctgatgagttgcggcagtttttttgccagtacggagaagtggtagatgtc
ttcattcccaaaccgttcagggcttttgcctttgttacgtttgcagatgatcaggttgcc
caatctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaaacacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
ggtggctttgggaatcagggtggatttggtaacagtagagggggtggagctggtttggga
aacaatcaaggtagtaatatgggcggagggatgaactttggtgcttttagcattaatcca
gcaatgatggctgcagcccaggcagctctgcagagcagctggggtatgatgggcatgtta
gccagtcagcagaaccagtcaggcccatcgggtaataaccaaagccaaggcaacatgcag
agggagccaaatcaggcttttggttctggaaataactcttatactggttctaattcaggt
gcagcaattggttggggatcagcatcaaatgcagggtcaggcagtggttttaatggaggc
tttggctcaagtatggattctaaatcttctggctggggaatgtag
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