Brugia malayi (filaria): BM_BM6953
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Entry
BM_BM6953 CDS
T01050
Symbol
Bma-lsm-3
Name
(RefSeq) Uncharacterized protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03018
RNA degradation
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM6953 (Bma-lsm-3)
09123 Folding, sorting and degradation
03018 RNA degradation
BM_BM6953 (Bma-lsm-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM6953 (Bma-lsm-3)
03041 Spliceosome [BR:
bmy03041
]
BM_BM6953 (Bma-lsm-3)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BM_BM6953 (Bma-lsm-3)
mRNA degradation factors
5'-3' decay
Lsm complex
BM_BM6953 (Bma-lsm-3)
Spliceosome [BR:
bmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BM_BM6953 (Bma-lsm-3)
Complex C
U2 snRNP components
BM_BM6953 (Bma-lsm-3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LXG
Peptidase_M16_M
DUF4941
TIG_SUH
CREPT
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
6102658
NCBI-ProteinID:
XP_042929713
UniProt:
A0A0H5S714
LinkDB
All DBs
Position
Unknown
AA seq
122 aa
AA seq
DB search
MLIHVCFMDYRRCAVRLFRMAAEQGQTNIVSTGVEEPLDLIRLSLDERIYVKMRNDREVR
GRLHAFDQHLNMILSQVEETVTTVELDEENFEEMHKQTKRQIPMLFVRGDAIILVAPPLR
HT
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgttaatccatgtttgttttatggattataggaggtgtgctgtccgactgtttaggatg
gcagcagaacagggacaaacaaacattgtcagtacaggtgtggaagagccattggattta
attcgattgagtttggatgaacgcatttatgtgaaaatgcgcaacgatcgtgaggtccga
ggtcgtttgcatgcctttgaccaacatttaaacatgatattgtcacaagtggaagaaaca
gtaaccactgtcgaactggatgaagaaaattttgaggaaatgcataaacagacgaagcgt
caaataccgatgttgtttgttcggggtgatgctattatacttgttgctccacctttgaga
catacataa
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