KEGG   Brassica napus (rape): 106346269
Entry
106346269         CDS       T04128                                 
Name
(RefSeq) transcription factor PIF3
  KO
K12126  phytochrome-interacting factor 3
Organism
bna  Brassica napus (rape)
Pathway
bna04075  Plant hormone signal transduction
bna04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:bna00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    106346269
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    106346269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    106346269
Transcription factors [BR:bna03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    106346269
SSDB
Motif
Pfam: HLH bHLH_SAC51 bHLH_LHW
Other DBs
NCBI-GeneID: 106346269
NCBI-ProteinID: XP_013640994
LinkDB
Position
A6:3650798..3654036
AA seq 536 aa
MLRGSRFLSSPPASSSSVSCTPLFSQVSVCKGNTMPLFELFRLANANVEYAQDENTSPPV
DEVVELVWENGQISTQSQSSRSRNIPPPQSIHQARAREIGTGSKATMVDEIPMSVPSLMT
GLSQDDDLVPWLNPHQSLDGYCSDLLHDVSPVTVNEQESDAFPRRNNGNELAPAASSSQF
NGFDSHSLYGTGRARDPVSQPAKPDQFTQRQEPLVTSNKPGLLNFSHFLRTAALAKTNNV
SKEKSPQSPPNVFQTRVLGAKDKVLNEPKDNNQKTCLVSEDSNRKEQESEKAVVCSSVGS
GNSLDGPSESPLKRKHLDVQDIECHSEDVEGESGDGRKETAPSRTGIGSKRSRSAEVHNL
SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQFMSMASGYYMPPV
MFPPGMGHHYQAAAMAMGMGMPYAMGLPDMSRGGPSVNNGPQFQVPGMQQPVAMAIPRVS
AGGFFGSSTVEMNKSDDGSTRDLSGGTKDQTTTKDNNSLRPIKRKQASSDQFCGSL
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgcttcgaggatctcgttttctctcttcgccgccagcttcgtcttcttcagtttcttgt
acccctctgttttcccaggtctctgtctgtaagggaaacaccatgcctctgtttgagctt
ttcaggctcgccaacgctaatgttgaatatgctcaagacgagaacacttctccacccgtg
gatgaagttgttgagctggtttgggaaaacggtcagatctcaactcaaagccagtcgagc
agatcaagaaacatcccaccaccacaatctattcatcaagcaagagctagagagatcgga
actggctcaaaggccacgatggtggacgagatcccgatgtcagtgccctcactaatgacc
ggtttgagtcaagacgatgacttggttccgtggctgaaccctcatcaatcccttgatgga
tattgctctgatctcttgcatgatgtttctcctgttaccgtcaacgagcaagagagcgat
gctttcccgagaagaaacaatgggaatgaattagctccggctgcttcttcatctcagttc
aacggttttgattcacattctctgtatggaaccggtagagctagagatcctgttagccaa
ccagccaaaccagatcaattcactcagagacaggaaccgttagtaactagcaacaagcct
ggtttgctcaacttttcgcatttcttacgcacggcagctttggctaagactaataatgtc
tctaaagagaagagtcctcaaagcccgccgaatgtgtttcagactagagttcttggagct
aaagacaaggttctcaacgagcctaaggataataaccaaaagacttgcttagtttcagaa
gactcaaatagaaaagagcaagagagtgaaaaggctgttgtgtgttcttctgttgggtct
ggtaatagtctcgatggaccttctgaaagtcctttaaaaagaaagcatttggatgttcag
gacattgagtgtcatagtgaagatgttgagggagaatcaggagatggaagaaaagaaaca
gctccatctcgaacaggcattggttcaaagagaagccgctcggctgaagtgcataatctg
tctgaaaggagacggcgtgataggattaacgagaagatgcgtgctcttcaagaactcata
ccaaactgcaacaaggtggacaaagcttcgatgctagatgaagcaatcgagtatctaaag
tcacttcaacttcaagtacagttcatgtcaatggcgtctggttactacatgccaccggtt
atgttcccaccgggtatggggcatcattaccaagcagcagcaatggcgatgggcatggga
atgccttatgcaatgggcttgcctgatatgagccgtggaggtccctctgttaacaacgga
ccacagttccaggttcccgggatgcaacaaccagtggccatggctattccacgtgtctct
gctggtggtttctttggttcttcaacggtggagatgaataagagtgatgatggttcgact
agagatttatctggtggtactaaagatcaaacaacgacaaaggacaacaatagcttgaga
ccgattaagagaaaacaggcgtcttctgatcagttttgtggatcgttatga

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