Brassica napus (rape): 106348882
Help
Entry
106348882 CDS
T04128
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106348882
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106348882
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106348882
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
106348882
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106348882
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106348882
Prokaryotic type
Other AARSs
106348882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
106348882
NCBI-ProteinID:
XP_048591195
LinkDB
All DBs
Position
A6:23527655..23534954
Genome browser
AA seq
1091 aa
AA seq
DB search
MSSFFKSFAGNPREAAAMAMVQSSSYRVLSGRNCSNIRRTTPLDSFLAKGRSPVKAFSFL
YVSRYSTQPNNEFGHSSKRRSRGPVMAAKKAADGEKQEDGKYKHTVDLPKTGFGMRANSL
TREPELQKLWEENQVFKRVSDNNKGGSFILHDGPPYANGDLHMGHALNKILKDIINRYKL
LQNYKVQYIPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFK
RFGVWADWNNPYLTLDPEYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEY
PEGHVSRSIYAIFKLVGGAKTSLLDEFIPNICLAVWTTTPWTIPANAAVAVNAKLQYSVV
EVHSSPEDESASTGKKKKMPGKVLKTQQNLCVIVATDLVPALEAKWGVKLIIRKTFLGAD
LENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLPIVSPVDD
GGNFTEEAGQFRGLSVLGDGNSAVVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATE
QWFASVEGFRKATMDAINDVKWIPHQAVNRISAMTSSRSDWCISRQRTWGVPIPVFYHVE
TKEPLMNEETVEHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYEKGTDTMDVWFDSG
SSWAGVLGKREGLTFPADVYLEGTDQHRGWFQSSLLTSIATKGKAPYSAVITHGFVLDEK
GMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRLWVSSVDYAGDVLIGPQILRQMSD
IYRKLRGTLRYLLGNLHDWRVDNAVPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKI
FQIIQRFTIVDLSNFYFDIAKDRLYTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLA
EDVWQNLPFEYKNEDGSAAKFVFELKWPLLNEQWLSFPAEDVLFWERLLELRTEVNKVLE
LARNGKLIGSSLEAKVYLHTANVSMAPRLLEMCEAQNEADTLQRIFLTSQVEVLSSMETE
MVSSVQHTGEYVEGENKVWIGVSRAEGSKCERCWNYSGQVGSFSEHPTLCGRCFNVIVAN
PPEPVAAAVIN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttcttcaaatcttttgccggaaatccgagggaagcagctgccatggcaatg
gtgcaatcctcatcttacagagtattgtcaggtagaaactgttcaaatataaggagaacc
acaccgttggattcctttctcgccaagggaaggtctcccgtcaaggcattttctttccta
tacgtctcacggtattcaactcagcccaataatgagtttggtcattcatcaaagcgtagg
tctcgtgggcctgttatggcagcaaagaaagcagctgacggggaaaagcaagaagatgga
aagtacaagcacacagttgacttgccaaagacaggttttggtatgagagcgaattcattg
acaagggaacctgaactccagaagctgtgggaggagaaccaggtcttcaagagagtttct
gataataacaaaggagggagtttcattcttcatgatggtcctccttatgccaatggtgac
ctgcatatgggtcatgctcttaacaagattctgaaggatatcattaatcgctataagctg
ctccaaaactataaagttcagtacattcctggctgggattgtcatggccttccaattgag
ttgaaagttctgcagtccctggatcaggaagtgagaaaggaacttacaccactgaagtta
agggcgaaggcggctaaatttgcgaaagcaacagtcaaaacacaaatggagtcatttaag
cggtttggagtatgggcagactggaacaatccttatctaactcttgatccggaatatgaa
gcagcccagattgaagtatttggccagatggccttgcaagggtacatctatagaggaagg
aaaccagtacactggagcccttcatctcgtactgcccttgcagaagctgaactagagtat
ccggagggtcatgtttcaagaagcatatatgctatttttaaattggttggtggagcgaaa
acaagccttttagatgagtttattcctaatatatgcttggcagtatggacaaccacacct
tggactattccagccaatgctgctgtggcggtgaatgcaaagcttcagtactctgttgtt
gaagtgcattcatccccagaagatgaatctgcgtcgacagggaagaaaaagaaaatgcct
gggaaggttctgaagactcaacaaaatctttgcgtgattgtagcgaccgaccttgtacca
gcattagaagcaaaatggggtgtgaagcttatcataagaaaaacattccttggtgctgat
cttgaaaattgcaggtacacacatccaattgacaacagggactgtccagtcgttataggg
ggtgactacataaccacggaatcaggaacaggattggtccacactgcccctggtcatggt
caggaggattatgcaaccggtctgaagtatggactgcctattgtctctcctgtggatgat
ggagggaatttcactgaagaagctggacagtttagagggctctctgtccttggagacggg
aatagtgctgttgtcagttacttggatgaaaatatgtctctggtcatggaagaatcttat
gctcataaatacccatatgattggcgaactaagaaaccaacgatttttagagcaactgag
cagtggtttgcatcagttgaaggatttcgcaaggccactatggatgcaatcaacgatgta
aaatggataccacatcaggcagttaacagaatatctgccatgacctccagccgatctgat
tggtgcatctcgagacaaaggacgtggggtgtccctattcctgtcttttatcatgttgag
acaaaagagcccctcatgaatgaggagacagttgaacatgttaagtctataatttcccaa
aagggcagtgatgcgtggtggtatatgtcggtggaagacctacttcctgagaaatatcgt
gataaagcagctgattatgaaaaagggactgatacaatggatgtctggtttgactcaggt
tcctcttgggctggtgtattggggaaacgcgagggtcttacttttcctgcagatgtgtat
ctagaaggtactgatcagcatcgtggatggttccagagctctttgttaacaagcatcgca
acaaaaggcaaggctccctattctgccgtcataacacatggttttgtactggatgagaag
ggtatgaaaatgagcaagtctttgggtaatgtggttgacccacgtttggtcattgaagga
gggaaaaattcaaaggacgcacctgcttatggagctgatgttatgcgtctctgggtttct
agtgtagattacgcaggagatgttctaattggcccacaaattcttcggcagatgtctgat
atatataggaaactgagaggaacgttgagatatctcttgggcaatcttcatgattggaga
gttgataatgctgtgccataccaggatttacccatcattgatcagcatgctctcttccag
cttgagaatgttgtaaagaacatacaagagtgttacgagaactaccagtttttcaaaata
ttccagatcatacaacgattcacaattgttgatctgtcaaatttctacttcgatattgct
aaagatagactgtatactgggggaacttcgagttttaccagaagaagctgtcaaacagtt
ctttcaacacatcttttatccatattgagagtgatcgcgcccatagtacctcacctagca
gaagatgtctggcaaaatctaccatttgagtacaaaaatgaagatggctctgcagcaaag
tttgtctttgaacttaaatggcctctgttgaatgaacagtggctttcatttcctgctgaa
gacgttctcttctgggaaaggcttctcgagttgaggaccgaggtgaacaaagtgttggag
cttgcacgtaatgggaaattaatcggttccagtttagaagcaaaggtgtatctgcatacc
gccaatgtaagcatggctccgagattattagagatgtgtgaagctcagaatgaagctgac
acgctgcaacgcatattcctcacatcacaggttgaggtattgtcgtcaatggagacggag
atggtaagcagtgtgcagcacacaggagagtatgtggagggagagaacaaagtgtggatt
ggtgtgtcacgtgccgagggatccaagtgcgagaggtgctggaactactcaggccaggtc
gggtccttttctgaacatcccactctctgtggacgctgcttcaatgtcattgttgctaat
ccgcctgagcctgtggctgcagctgtaatcaactga
DBGET
integrated database retrieval system
