Brassica napus (rape): 106357954
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Entry
106357954 CDS
T04128
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106357954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106357954
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106357954
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tom22
Motif
Other DBs
NCBI-GeneID:
106357954
NCBI-ProteinID:
XP_048619671
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Position
C7:1063499..1066493
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AA seq
521 aa
AA seq
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MNHHRHHFVPDFETDDDYVNANTNSSSSNLPRKPIIGEEEDGDLMELLWHNGQVVLQNQR
PNTKKQPLSSSAAVKLHNGAPPPPLDHNLFIQEDEMSSWLHYPLRDDDFCSDLFFPAAPS
SERQTSNQVTAARPPVPSTVRPPEPSSMRPPAPSPVRPPAPSSVKPAVRNFMNFSRLRGD
FTGGNGRGESGPSIAKSTVRESAKVNPSATPASSAAREPDLTRRTDGADSRGAGDLGSKS
AVDGGGAYTVGHNRKGKAVVTTERTSENLGASSSVASKSEIEPLETIVDERKRKEREEVG
STECRNEEAKQGRGSSSTKRSRAAEVHNLSERKRRDRINERMKALQELIPCCNKSDKASM
LDEAIEYMKSLQLQIQMMSMGCGMMPMMYTGMQQYMPHMAMGMGMGMGVEMGMNRPPPPP
PPFMPFPNMLASQRPLPPQTRMGGYPAVQASDPSRVYGPNQQFDPNSSQAQFSGYMDPFQ
QFRSLYPSQPPQFQNQAASYPSSSRVSSSKESEDHGNQTTS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccaccgccaccatttcgttcctgacttcgagaccgatgatgattatgtcaac
gctaacacaaactcttcttcttcaaatcttcctagaaaacccatcataggtgaagaagaa
gatggtgatctcatggagcttctatggcacaacggtcaggtggttctccaaaatcaaaga
ccaaacaccaagaaacaacctctttcttcctctgctgctgtcaagcttcacaacggagct
cctcccccgccgttggatcataatctcttcatccaggaagacgaaatgtcctcatggctt
cattatcctctccgtgacgatgatttctgctcagatcttttcttccccgccgcgccgtca
tctgagagacagacctcgaatcaggtcaccgccgccaggccaccggtaccttcgactgtg
aggccgccggaaccgtcgtctatgaggccaccggcaccttccccggtgaggccaccagca
ccgtcgtctgtgaagcctgcggtacggaacttcatgaacttctcgaggctgagaggggat
ttcaccggcggtaacggtagaggagaatctggaccgtcgattgcgaagtcgactgtgaga
gaatcggcgaaagtaaaccctagcgctacaccggcgtcgtcggcagcgagggaacccgat
ctaacacggcggacagacggcgctgacagtcgaggggcgggtgatttaggatccaaatcc
gccgtagatggaggcggagcgtatactgtcggacataatcggaagggaaaggcagtggtc
acgacggagcggacgagtgagaatctcggtgcatcgtcttctgttgcgtcgaagagtgaa
atcgagccacttgagacgatcgtggatgagaggaaacgaaaggagagagaagaagttggc
tcgactgagtgccggaacgaggaggctaaacaaggacgtggatcatcatcgacaaagaga
tctcgtgctgctgaagttcataatctctctgaaaggaaacggagagataggatcaacgag
aggatgaaagctcttcaagaactcattccttgctgcaacaagtcagataaagcttcaatg
cttgatgaagctattgagtacatgaaatctctccagcttcaaatacagatgatgtcaatg
ggatgtggtatgatgccgatgatgtacaccggtatgcaacagtacatgcctcacatggct
atgggaatgggaatgggaatgggcgtggagatgggtatgaacaggcctcctcctcctcct
cctccgttcatgccattcccaaatatgttagcttctcaaagacctttacctcctcaaact
cgtatgggcggctaccctgctgttcaagcttctgatccatcaagagtatatggaccaaac
cagcagttcgatccaaactcgagccaggctcagttttcgggttacatggatccatttcag
caattccgcagtctctacccgagccaaccacctcagtttcagaatcaagcagcatcgtac
ccaagttcaagcagggtaagtagtagcaaggaatccgaggatcatggaaaccaaacaaca
agttga
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