Brassica napus (rape): 106361940
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Entry
106361940 CDS
T04128
Name
(RefSeq) probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial isoform X1
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
bna
Brassica napus (rape)
Pathway
bna00540
Lipopolysaccharide biosynthesis
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
106361940
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bna01005
]
106361940
Enzymes [BR:
bna01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
106361940
Lipopolysaccharide biosynthesis proteins [BR:
bna01005
]
Lipid A
106361940
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Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-GeneID:
106361940
NCBI-ProteinID:
XP_013657202
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Position
C3:complement(55496651..55498954)
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AA seq
329 aa
AA seq
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MSLSSAVKAKKSTLISLMRLSSANSSSSSTVSLKPSGRLQQTLAGSVEVNGKALHSGKVS
TVKLLPAIAGAGRYLEFRSRSIPASIEFAQESPLCTTLLKDGLRIRTVEHLLSALEAKGV
DNCRIQIESESESPDDREVEVPICDGSAKEWVEAIEEAGINVAQNHDGETVEKMVAHVNK
PVYVRKNDSFVAVFPDLETRITCGIDFPQVPAIGCQWFSWKPEHHSSYAKDIAPSRTFCV
YEEVEKMREAGLIKGGSLDNAIVCSAEHGWMNPPLRFDNEACRHKILDLIGDLSLVARGG
NGGFPVAHIVAFKAGHALHTELARHLTID
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctctagcgccgtcaaagccaagaaatccactctcatctctttgatgcgacta
tcctccgccaattcatcgtcttcgtcaacagtctccttgaaaccaagcgggcggttacag
caaactctcgcgggatcggtggaagtgaacggtaaggctctgcattccggcaaggtttcg
acggtgaagctacttccggcgatcgcgggagctgggaggtacttggagtttcgttccaga
tcaatccccgcgtcgattgagtttgctcaggagtcgcctctctgcacaacgctgttgaaa
gacggtctcaggatccgaaccgtcgagcacttgctatcagctcttgaggctaagggcgtt
gataactgcagaattcaaatcgagagcgagagcgagagtccagatgatcgggaagtcgag
gtccctatttgtgatggatcagctaaagaatgggtagaagcgatcgaagaagctggcata
aacgtagctcaaaaccatgatggagaaactgtggagaagatggtagcacatgtgaacaag
cctgtgtacgttcgcaagaacgattctttcgtagctgtgttccctgatttagagactcga
attacttgtggtatcgacttcccacaggtgcctgctataggctgccagtggttttcttgg
aaacctgaacatcactcttcgtatgcaaaagatatagcaccgtcgagaacgttttgtgtc
tatgaagaggtggagaaaatgcgggaagcagggctcattaaaggaggttctctggataat
gcaatcgtttgtagcgccgagcatggatggatgaaccctcctctgcggtttgataatgaa
gcatgtcgacataagattttggaccttattggtgacctctcccttgtagcacgaggcgga
aatggaggattccctgtggctcacatagtagcatttaaggcgggtcatgcactgcacact
gagttggcacgtcatcttaccatcgactga
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