Brassica napus (rape): 106396919
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Entry
106396919 CDS
T04128
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
bna
Brassica napus (rape)
Pathway
bna00280
Valine, leucine and isoleucine degradation
bna00650
Butanoate metabolism
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
106396919
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106396919
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106396919
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
106396919
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
SpaA
Motif
Other DBs
NCBI-GeneID:
106396919
NCBI-ProteinID:
XP_048630801
LinkDB
All DBs
AA seq
461 aa
AA seq
DB search
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA
VTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG
TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK
LRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSIND
ADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEK
VSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSG
STATMFSLRLCENQTPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFV
TTKEGILDLLAPGTYYLKEVDSLYRRFYGKKGDDGSITNGH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacgtagggatattggctatggacatctatttccctcccacctgtgttcaa
caggaagctttggaagctcatgatggagcaagcaaagggaaatacaccattggacttggt
caagattgtttagctttttgcactgagcttgaagatgttatctcaatgagtttcaatgcg
gtgacatctcttcttgaaaagtacaagattgaccccaaacaaattgggcgtcttgaagta
ggcagtgagactgtcattgacaagagcaagtccatcaaaaccttcttgatgcaactcttt
gagaaatgtggaaacactgatgtagaaggtgttgactcgaccaatgcttgttatggtgga
actgcggctttgctaaactgtgtcaattgggttgagagtaactcctgggatggacgctat
ggccttgtcatttgtactgacagtgcggtttatgcagaaggacccgcaaggcccactgga
ggagcagctgccattgctatgttgataggaccagatgctcctattgtttttgagagcaaa
ttgagaggaagccacatggctcatgtctatgacttttacaagccaaatcttgctagcgag
tacccggttgttgatggtaagctttcacagacatgctaccttatggcacttgactcttgc
tataaacatttatgcaacaagtttgagaaacttgagggcaaagagttctccatcaatgat
gctgattactttgtcttccattctccatacaacaaacttgtgcagaaaagctttgctcgt
ctcttgtacaacgacttcttgagaaacgcaagctccattgacgaggctgccaaagaaaag
ttcactccttattcctccttgtccctcgatgagagttaccaaagccgtgatcttgaaaag
gtgtcacaacaactagcaaaaacgtattatgatgctaaagtgcaaccaacgactttagta
ccaaaacaagtcggtaacatgtacactgcttctctctacgcagcattcgcttccctcgtc
cacaacaaacacagcgatttggcgggaaagcgggtggttatgttctcatatggaagtggt
tcaaccgcaacaatgttctcattgcgtctctgcgagaaccagactcctttcagcttatca
aacatcgcttctgtaatggatgttggcggtaaattgaaggctagacatgagtatgcacct
gagaagtttgtggagacaatgaagctaatggaacataggtacggagcaaaggagtttgtg
acgaccaaggaaggtatcttagaccttttggctccggggacttattatctgaaagaggtt
gattcattgtaccggagattctatggcaagaaaggagacgatggatccataaccaatgga
cactga
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