Brassica napus (rape): 106402276
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Entry
106402276 CDS
T04128
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106402276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106402276
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106402276
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
AAA_25
ORC-CDC6-like
SMC_N
AAA_28
AAA_23
AAA
NACHT
AAA_15
AAA_18
SRP54
AAA_5
AAA_30
PduV-EutP
AAA_13
AAA_33
Zeta_toxin
AAA_24
AAA_22
DLIC
Arf
AAA_16
AAA_14
Motif
Other DBs
NCBI-GeneID:
106402276
NCBI-ProteinID:
XP_013698434
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Position
C8:896106..897975
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AA seq
291 aa
AA seq
DB search
MAAKDQATTSDDAIRVSGMEFSYEAEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKIL
AGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTIGSAGEVPLQGDFSAEHMI
FGVEGIDPVRRDKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLD
VVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQNGELNRSSKMADISEMK
TSPNLLSVVESWLRSETKIYKKKKKEPVAAWKPTPFDNSPFRSSRHMAYYR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagatcaggcgacgaccagtgatgatgccattagagttagcggtatggag
ttttcttatgaagcggaggatcctatattcttcgatttcaacctcgatcttccagcagga
tctcgctgccttcttgttggcgccaatggatctggcaagacaaccttgttgaagattctg
gctggaaagcatatggttggaggaaagaacgttgtacaagttctaagccgctctgctttc
catgatactcaacttgtttgcagtggtgacttgtcttaccttggaggatcttggagtaaa
accattggttcggctggtgaggttcctcttcagggagacttttcagcagaacatatgata
tttggagttgaaggaatcgatccggtgagaagagataaactgattgatcttcttgacatc
aaccttcagtggcgtatgcataaggtttctgatgggcaaaaacgccgagttcagatatgc
atgggactcttacatccattcaaggtgttgttacttgacgaggtaactgttgaccttgat
gttgttgcaaggatggatttgctggaattcttcaaagaagaatgtgatcagagaggagct
acaattgtatatgcaactcatatattcgacgggctagagacatgggctacacatttggct
tacattcagaacggtgagctgaatcgttcatcaaaaatggcagacatcagcgagatgaaa
acttcacccaacctcctctccgtggtagaatcttggctccgttctgaaaccaaaatttac
aagaaaaagaagaaggagcctgtggcagcatggaaaccaactccatttgataactctcct
tttaggtcatctagacacatggcttactaccgatga
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