Brassica napus (rape): 106408993
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Entry
106408993 CDS
T04128
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04120
Ubiquitin mediated proteolysis
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106408993
04120 Ubiquitin mediated proteolysis
106408993
09124 Replication and repair
03420 Nucleotide excision repair
106408993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106408993
03400 DNA repair and recombination proteins [BR:
bna03400
]
106408993
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
106408993
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106408993
Multi subunit type E3
SCF complex
Ring finger protein
106408993
Cul2 complex
106408993
Cul3 complex
106408993
Cul4 complex
106408993
Cul7 complex
106408993
Cul8 complex
106408993
Cul9 complex
106408993
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106408993
TCR (transcription coupled repair) factors
Cul4-CSA complex
106408993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
106408993
NCBI-ProteinID:
XP_013705139
UniProt:
A0ABQ7XWM2
A0A078FQ34
LinkDB
All DBs
Position
C9:53833855..53835130
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVNMIPAGESSSSVVASSSSKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctacactcgatagcgacgtaaacatgatccctgcgggggaatcctcgagcagcgtc
gtggcttcttcgtcgagcaagaaggcgaagagattcgaagtgaagaagtggagcgccgtc
gctctttgggcttgggatatcgtcgtcgacaattgcgccatctgcagaaaccacatcatg
gatctctgcattgagtgtcaggctaatcaggccagcgctactagtgaggaatgcactgtt
gcttggggggtttgcaatcatgctttccactttcactgtatcagcagatggttgaagact
cgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa
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