KEGG   Brassica napus (rape): 106408993
Entry
106408993         CDS       T04128                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04120  Ubiquitin mediated proteolysis
bna04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106408993
   04120 Ubiquitin mediated proteolysis
    106408993
  09124 Replication and repair
   03420 Nucleotide excision repair
    106408993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106408993
   03400 DNA repair and recombination proteins [BR:bna03400]
    106408993
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     106408993
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   106408993
  Multi subunit type E3
   SCF complex
    Ring finger protein
     106408993
   Cul2 complex
     106408993
   Cul3 complex
     106408993
   Cul4 complex
     106408993
   Cul7 complex
     106408993
   Cul8 complex
     106408993
   Cul9 complex
     106408993
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106408993
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106408993
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 106408993
NCBI-ProteinID: XP_013705139
UniProt: A0ABQ7XWM2 A0A078FQ34
LinkDB
Position
C9:53833855..53835130
AA seq 118 aa
MATLDSDVNMIPAGESSSSVVASSSSKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggctacactcgatagcgacgtaaacatgatccctgcgggggaatcctcgagcagcgtc
gtggcttcttcgtcgagcaagaaggcgaagagattcgaagtgaagaagtggagcgccgtc
gctctttgggcttgggatatcgtcgtcgacaattgcgccatctgcagaaaccacatcatg
gatctctgcattgagtgtcaggctaatcaggccagcgctactagtgaggaatgcactgtt
gcttggggggtttgcaatcatgctttccactttcactgtatcagcagatggttgaagact
cgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa

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