Brassica napus (rape): 106409243
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Entry
106409243 CDS
T04128
Name
(RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 isoform X1
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
bna
Brassica napus (rape)
Pathway
bna00071
Fatty acid degradation
bna00592
alpha-Linolenic acid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01212
Fatty acid metabolism
Module
bna_M00087
beta-Oxidation
bna_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
106409243
00592 alpha-Linolenic acid metabolism
106409243
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
106409243
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
106409243
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
106409243
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-GeneID:
106409243
NCBI-ProteinID:
XP_013705355
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Position
C7:complement(51238925..51243579)
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AA seq
721 aa
AA seq
DB search
MAKKNGVTMEVGEDGVAVITISNPPVNSLSSPILSEWNEKLQEANKRSDVKAIVLTGKGG
VFSGGFDLNIFHQVHKTGDMSLMPDISFDLVGTLMEDSRKPIVAAVEGVALGGGFELALA
SHARVAAPKAQLTLPELTLGLIPGFGGTQRLPRLVGLAKAIDMILLSKSISSEEGHKLGL
IDALVPPGDLLSTSRKWALDIALGRKPFLRSLYRTDKIGSLSEARAILNNARQLAKKIAP
NMPQHHVCIDVIEEGIIHGGYSGILKEGEVFKQLIPSDTVKALVHVYFAQRAISKVPNVT
DVGLKPRPMKKVAVIGGGLMGSGITTALLLSNIRVVLKEINSEYLLKGINSVEANLNSLV
SRGKLTQDKAEKAFSLLKGVLDYTDFKDVDMVIEAVIENIELKQKIFIEIEEACPSHCIL
ASNTSTIDLNVIGEKTNSKDRIVGAHFFSPAHIMTLLEIVRTENTSPQVILDLMALGKAI
KKVPVVVGNCIGFAVNRTFFPYAQAAHMLVNLGVDLFRVDNVITSFGLPLGPFQLGDLAG
HGIAIATKDIYDKAFGDQMFRSPLTELLLKSGRNGKINGRGYYIYQKGSKPKPDPSVISV
VEESRKLTNIMPGGKAITVTDKDIVEMILFPVVNEACRVLDEGVVIRASDLDVASVLGMS
FPSYRGGVLFWADTVGPKYIYERLKRLSETYGGFFKPSKYLEERAMRGMLLSDPKSSRSR
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaatggagtgacgatggaagttggggaagatggtgttgctgtgatcacc
atttcgaaccctcctgttaactctttgtccagcccaattctttctgagtggaatgagaag
cttcaagaagctaataagaggagtgatgttaaggccatcgtcttgaccgggaaaggtgga
gtattctctggtggttttgaccttaatatcttccaccaagttcataagactggtgatatg
tcgcttatgcctgatatatcctttgatcttgtgggcacgctgatggaagactctaggaag
cccattgttgctgcagttgaaggagtagctcttggtggtggttttgaactggcactggcg
tctcatgctcgtgttgctgctcctaaagctcaactaaccttaccggagctgacacttgga
cttattccaggctttggaggaacccaacgtcttcctagactagtaggccttgctaaagca
attgatatgatactgctttccaagtcgatatcgtcagaggaggggcataaactgggtctc
attgatgctttggtgcctcctggagatctgttgagcacgtcaagaaagtgggctctagac
attgcacttggacgaaaaccctttttgcgctcactatacaggacggacaagattggttct
ttatctgaagctcgtgctatattgaataacgcaagacaactagctaagaaaatagcccca
aatatgcctcaacaccatgtttgcattgatgtgattgaagaaggaatcatccatggcgga
tacagtgggattcttaaggaaggagaagttttcaagcagttaataccgtcagacactgta
aaggcgcttgttcatgtttactttgcacagcgtgcaatatcaaaggtgcctaatgtaact
gacgtgggattgaaaccgagaccaatgaaaaaagttgcagttattggtggaggtctgatg
ggttccggcatcactactgctctactcttaagcaatataagagttgtgctcaaagaaata
aactcagaataccttctgaagggaataaactcagttgaagcaaatctcaatagcttggtg
tccaggggaaaactgacacaagataaagcagagaaggcattttctttgctcaagggagta
ctagactacacagatttcaaagatgtggacatggtcatagaggcagtgattgaaaacatt
gagttgaaacagaagatattcatagaaatcgaagaggcatgtccatcacattgcatattg
gcgagcaatacatcaaccatcgacctcaacgtgataggagaaaaaactaactcaaaagat
cgcattgttggcgcacatttcttcagcccggcgcatattatgacacttctagagatagtc
cgtacagagaatacttctccgcaagtgattcttgatctcatggcgcttggaaaggccata
aagaaagttccagtggtggttggaaactgcataggctttgcagtgaatagaacattcttt
ccgtatgcacaagctgcacatatgttggtcaatctcggtgttgacttgttcagagtggac
aatgttattacctctttcggtttgcccttgggtcctttccagctaggtgatttggctgga
cacggtattgcaatagcaactaaggatatatatgacaaggcctttggtgaccagatgttc
aggtctccattgactgagcttctgcttaagagcgggcgaaacggcaaaatcaatgggaga
ggatactatatataccaaaaaggaagcaaaccaaaaccagatccatcagtgatttcagtt
gttgaggaatcaaggaagcttaccaatatcatgcctggtgggaaggctataacagtaact
gataaagatattgtagagatgatcttgttccctgtggttaacgaggcgtgccgtgtctta
gatgaaggagttgtgatcagagcctcagacttggatgttgcgtctgttctaggaatgagt
tttccttcttaccgcggtggagttcttttttgggcagacacggttggaccgaagtacata
tatgaaaggctcaagagattatcagagacttatggcggctttttcaaaccgtccaagtat
ctggaggaaagggcaatgagaggaatgcttttgagtgatccgaaatcatcaaggtctcgg
ctgtaa
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