Brassica napus (rape): 106415572
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Entry
106415572 CDS
T04128
Name
(RefSeq) triosephosphate isomerase, chloroplastic-like
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00010
Glycolysis / Gluconeogenesis
bna00051
Fructose and mannose metabolism
bna00562
Inositol phosphate metabolism
bna00710
Carbon fixation by Calvin cycle
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
bna_M00002
Glycolysis, core module involving three-carbon compounds
bna_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
bna_M00165
Reductive pentose phosphate cycle (Calvin cycle)
bna_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
106415572
00051 Fructose and mannose metabolism
106415572
00562 Inositol phosphate metabolism
106415572
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
106415572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106415572
Enzymes [BR:
bna01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
106415572
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106415572
Exosomal proteins of bladder cancer cells
106415572
Exosomal proteins of melanoma cells
106415572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-GeneID:
106415572
NCBI-ProteinID:
XP_013711779
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All DBs
Position
C8:43911917..43914411
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AA seq
320 aa
AA seq
DB search
MASSLTAQISCGTQPSAPSFSGLRRTCPKLDAAVSFSHHSFCNRVNSSIRLVSSSNRSPR
GVVAMAGSGKFFVGGNWKCNGTKDSIAKLVSDLNSASLEADVDVVVSPPFVYIDQVKSSL
TDRIEISGQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEKDEFIGKKAAY
ALSEGLGVIACIGEKLEEREAGKTFDICFEQLKAFADAVPSWDKVVVAYEPVWAIGTGKV
ASPQQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKEEDIDGFLVGGAS
LKGPEFATIVNSATSKKVTA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctctcactgcccaaatatcatgtggcactcagccctccgccccttctttc
tccggcctccgccgcacctgtcccaagctcgacgccgccgtctccttctcccaccactcc
ttctgcaaccgcgttaactcctcaatccgtctcgtttcctcctcgaaccggtcgccaaga
ggcgtcgtcgccatggccggatccggcaagtttttcgttggaggaaactggaagtgtaac
gggactaaagactccatcgccaagcttgtctccgacctcaacagtgcatccttggaagct
gatgtagatgttgttgtgtcgcctccctttgtgtacatcgaccaagtcaaatcctccttg
acagaccgtattgagatatccggtcagaactcttgggttgggaaaggtggtgccttcacc
ggtgaaattagcgtggaacagctcaaagacattggatgcaagtgggtcattcttgggcat
tccgaaaggagacatgtcatcggtgaaaaagatgagtttattgggaagaaagctgcgtat
gcgttgagtgagggtctgggagtaatagcttgtatcggagagaagctagaagagagggaa
gcaggcaagacttttgatatctgcttcgagcaattgaaggcctttgctgatgctgtgcct
agctgggataaggtagtggttgcatacgagccagtatgggcaattggaactggtaaagtt
gcgtctcctcagcaagcacaggaagtccatgtagctgtccgcgattggctcaagaagaat
gtctctgaggaagttgcttccaaaacgagaatcatatacggaggttctgtcaatggaggc
aactgtgcagagcttgctaaagaagaagacattgatggatttctcgtcggtggtgcctcc
ttgaaggggcctgagtttgcgaccattgtgaactctgccacgtccaagaaagttaccgct
tga
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