Brassica napus (rape): 106419516
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Entry
106419516 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106419516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106419516
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106419516
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106419516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
FUSC-like
Motif
Other DBs
NCBI-GeneID:
106419516
NCBI-ProteinID:
XP_013715771
UniProt:
A0A816VJ67
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All DBs
Position
A3:4465126..4467469
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AA seq
292 aa
AA seq
DB search
MEMGFQENQQNQELTNLREIGSGHYGCSHYRRRCKIRAPCCDEVFDCRHCHNEAKDSLQT
EQLLRHDLPRHDVSKVICSLCETEQDVQQNCSSCGVCMGKYFCSKCKFFDDDLSKKQYHC
DECGICRTGGEENFFHCKRCRCCYSKVMEDKHRCVEGAMHHNCPVCFEYLFDSTRDITVL
RCGHTMHLQCTKDMGLHNRYTCPVCSKSICDMSNMWKKLDEEVAAYPMPKVYEDKMVWIL
CNDCGSNTNVRFHLIAHKCTSCGSYNTRQTQRGPDTTHSCSSGVPQVVGSTG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggtttccaggaaaatcagcaaaaccaagaacttaccaatcttagggagatt
ggatctgggcattatgggtgctcacattatagaagacgatgcaagatcagagcaccttgt
tgcgatgaagttttcgattgcagacattgccacaacgaagctaaggactctcttcagact
gaacagcttcttcgacatgatcttcctcggcatgatgtttcaaaggttatttgctcgctg
tgtgagacagaacaagatgttcagcagaactgctccagttgtggcgtatgtatggggaag
tacttttgctcaaaatgcaagttcttcgatgatgatctttccaagaagcaataccactgc
gatgaatgtgggatctgcaggaccggaggagaagaaaacttcttccattgcaaaagatgt
cgatgttgctactccaaagtcatggaggacaagcaccgatgtgttgaaggtgcaatgcat
cacaattgtcccgtttgttttgagtatctgtttgattccacaagagatatcacggttttg
agatgtggtcacacaatgcatttacaatgcaccaaagatatggggttgcataaccgatac
acatgccctgtatgttctaaatccatatgtgacatgtccaacatgtggaagaaacttgat
gaagaggttgctgcatacccaatgccaaaagtgtacgaagacaagatggtatggattctt
tgcaatgactgtggttcaaacacgaatgttcggtttcatttgattgcgcataagtgcact
agctgcggttcatacaacactagacagacgcagagagggcctgatactactcactcttgc
tcttcaggagttcctcaggttgttggctcaaccggttaa
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