Brassica napus (rape): 106420738
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Entry
106420738 CDS
T04128
Name
(RefSeq) triosephosphate isomerase, chloroplastic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00010
Glycolysis / Gluconeogenesis
bna00051
Fructose and mannose metabolism
bna00562
Inositol phosphate metabolism
bna00710
Carbon fixation by Calvin cycle
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
bna_M00002
Glycolysis, core module involving three-carbon compounds
bna_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
bna_M00165
Reductive pentose phosphate cycle (Calvin cycle)
bna_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
106420738
00051 Fructose and mannose metabolism
106420738
00562 Inositol phosphate metabolism
106420738
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
106420738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106420738
Enzymes [BR:
bna01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
106420738
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106420738
Exosomal proteins of bladder cancer cells
106420738
Exosomal proteins of melanoma cells
106420738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-GeneID:
106420738
NCBI-ProteinID:
XP_013717025
UniProt:
A0A816JRX2
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All DBs
Position
C4:complement(47091291..47093326)
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AA seq
312 aa
AA seq
DB search
MASSLTAAGTQPSAPSFSGLRRTCLKLEAAVSFSHRVNSSIRLVSSSQRSPRGVVAMAGS
GKFFVGGNWKCNGTKDSITKLVSDLNTATLEPDVDVVVSPPFVYIDQVKSSLTDRIEISG
QNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGV
IACIGEKLEEREAGKTFDVCFDQLKAFADAVPSWDKVVVAYEPVWAIGTGKVASPQQAQE
VHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKEEDIDGFLVGGASLKGPEFAT
IVNSVTSKKVAA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctctcactgccgctggcactcagccctctgccccttctttctcgggcctc
cgccgcacttgccttaagctcgaagccgccgtctccttctcccaccgcgtcaactcatct
atccgtctcgtttcctcctcgcagcggtctcctagaggcgttgtcgccatggccggatcc
ggaaagtttttcgttggaggaaactggaagtgtaacgggactaaggactccatcaccaag
cttgtctctgacctcaacactgccaccttggaaccagatgttgatgtggttgtgtcgcct
ccatttgtgtacatcgaccaagtcaaatcttccttgacagaccgtattgaaatatctggt
cagaactcttgggttgggaaaggtggtgccttcaccggtgaaatcagcgtggaacagctc
aaagacattggctgcaagtgggtcattcttggccattccgaaaggagacatgtcatagga
gaaaaggatgagtttatcgggaagaaagctgcttacgcgttgagtgagggtcttggagta
atagcttgtatcggggagaagctggaagagagggaagcaggcaagacttttgatgtttgc
ttcgaccaattgaaggcctttgctgatgcggtgcctagctgggacaaggtagtggttgcg
tacgagccagtatgggcaattggaactggcaaagttgcatctcctcagcaagctcaggaa
gtccatgtagctgtccgtgattggctcaagaagaatgtctctgaagaagtcgcttccaaa
acgaggatcatatacggaggttctgtcaatggaggcaactgtgcagagcttgccaaagaa
gaagacattgatggttttcttgtcggcggtgcctccttgaagggacctgagtttgcgacc
attgtgaactcagtcacgtcaaagaaagttgctgcttga
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integrated database retrieval system