Brassica napus (rape): 106425686
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Entry
106425686 CDS
T04128
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04120
Ubiquitin mediated proteolysis
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106425686
04120 Ubiquitin mediated proteolysis
106425686
09124 Replication and repair
03420 Nucleotide excision repair
106425686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106425686
03400 DNA repair and recombination proteins [BR:
bna03400
]
106425686
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
106425686
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106425686
Multi subunit type E3
SCF complex
Ring finger protein
106425686
Cul2 complex
106425686
Cul3 complex
106425686
Cul4 complex
106425686
Cul7 complex
106425686
Cul8 complex
106425686
Cul9 complex
106425686
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106425686
TCR (transcription coupled repair) factors
Cul4-CSA complex
106425686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
106425686
NCBI-ProteinID:
XP_013721854
UniProt:
A0A078I4Y8
LinkDB
All DBs
Position
C2:complement(4294377..4295592)
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AA seq
119 aa
AA seq
DB search
MASLDSDVTMVPAGESSSSVAPSSSSTKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctcgattccgacgtcaccatggttcccgcaggagaatcctcaagcagcgtc
gccccatcgtcgtcgtccaccaagaaggcgaagagattcgaagttaagaagtggagcgcc
gtggctctctgggcttgggatatcgttgttgataattgcgctatctgcagaaaccacatc
atggatctgtgtattgaatgtcaggctaatcaggccagtgctacgagtgaggagtgcact
gttgcttggggagtttgcaaccacgccttccactttcactgcatcagcagatggctaaag
actcgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa
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