Brassica napus (rape): 106426291
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Entry
106426291 CDS
T04128
Name
(RefSeq) 4-coumarate--CoA ligase 3-like
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna00130
Ubiquinone and other terpenoid-quinone biosynthesis
bna00940
Phenylpropanoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
bna_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106426291
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106426291
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106426291
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106426291
NCBI-ProteinID:
XP_013722469
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Position
C6:38586352..38591902
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AA seq
565 aa
AA seq
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MITATLQEPQIHQPVDTTTPPADAPPTPPRIFRSKLPDIDIPNHLPLHNYCFQKLSSVSD
KPCLIVGSTGKNYTYGETHLICRRVAAGLHKMGIRKGDVIMILLQNSAEFVFSFMGASMI
GAVSTTANPFYTSQEIHKQVKSSGAKLIITHSHYVDKLRNLDGETRIGEDLTVITTEENP
PPENCLPFSTLLLTDDETTSLDVVDVGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQ
QVDGDNPNLYLKPNDVVLCVLPLFHIYSLNSVLLNSIRSGATVLLMHKFEIGALLDLIQR
HKVTVAALVPPLVIALAKNPTVNSYDLSSVRLVLSGAAPLGKDLEDSLGRRLPQAVLGQG
YGMTEAGPVLSMSLGFAKEPTPSKSGSCGTVVRNAELKVVHLETRLSLGYNQPGEICIRG
QQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEADEIFIVDRLKEVIKFKGFQVPPAEL
EALLINHHSIADAAVVPQRDEVAGEVPVAFVVRSNGNVITEEDIKEYIAKQVVFYKRLHK
VFFVPSIPKSPSGKILRKDLKAKLC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcaactctacaagaacctcagattcatcaaccggtggatacaactactccc
cccgccgatgctcctcctacgccgccgcgtattttccgatcaaagcttccggacatagac
atccccaaccacctccctctccacaattactgcttccagaagctctcctctgtttccgac
aagccttgtctgatcgtagggtccacgggaaaaaactacacgtacggcgaaacgcacctc
atatgtcggagagtcgccgccgggctacacaaaatggggattcgaaaaggcgacgtgata
atgatcctccttcaaaactcagccgagttcgtcttctccttcatgggcgcttccatgatc
ggcgccgtctccaccaccgcgaaccctttctacacttctcaggagattcacaaacaggtc
aaatcctccggagctaagcttataatcactcactcccattacgtcgataagctgagaaac
ctcgacggagaaacaagaatcggtgaagatctcaccgttatcaccacggaggagaatcct
cccccggagaattgtcttcctttctccacactactactcactgacgacgagacaacctcg
ctagatgttgttgatgtcggtggtgatgacgccgcggcgcttcctttctcttctggcacg
acggggttacctaaaggagtagttttaacgcacaagagcttaatcacgagcgtcgcgcaa
caagtcgatggagacaacccgaatctttacctgaaaccaaacgacgtcgtactctgcgtt
ttgcctcttttccacatctactcgctcaacagcgtccttctcaactccatccgatccggt
gcgacggttcttttgatgcacaaattcgaaatcggggcgttattggatctaatacagaga
cacaaggtgacggtagcggcgcttgttccgccgcttgtgattgctttggccaagaaccca
actgttaactcttacgatctctcttccgttagattggttctctccggtgcagctccctta
ggcaaagatctcgaggatagtctaggccgccgtctccctcaggccgtccttggccaggga
tatggtatgacagaggcaggaccagtgttgtcaatgagccttgggtttgccaaagagcca
actccgtcaaaatcaggctcttgtgggactgtagtccgaaacgcagagcttaaagtggtt
caccttgagacacgtctctctcttggttacaaccaacctggtgagatttgtatccgcggt
caacaaatcatgaaagagtacttgaacgatccggaagccacgtcagctacaattgacgag
gaaggttggcttcacacaggggacattgggtatgttgatgaagctgatgagatattcatt
gttgatcgactcaaagaggtcatcaagttcaaaggctttcaggtgcctccagctgagcta
gaggctttgctcatcaatcaccactccattgcggatgctgcggttgttcctcaaagagat
gaagtggctggagaagttccggtggctttcgtagtccgatcaaatggaaacgttatcacg
gaagaagatataaaagaatatatagccaaacaggtggtattctacaagagattgcacaag
gtcttctttgttccctccattcccaaatctccttccggaaaaattctgagaaaggatctt
aaagccaaactttgttaa
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