Brassica napus (rape): 106446320
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Entry
106446320 CDS
T04128
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106446320
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106446320
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106446320
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
106446320
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106446320
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106446320
Prokaryotic type
Other AARSs
106446320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
106446320
NCBI-ProteinID:
XP_048633502
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Position
A4:11167154..11173755
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AA seq
1175 aa
AA seq
DB search
MEEVCEGKEFSFPREEENVLSFWTQIDAFKTQLKRTEHLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVENEIDKKLDIKRRDQVLQMGIDKYNEE
CRSIVTRYVEEWEKVITRTGRWIDFRNDYKTMDLPFMESVWWVFAQLFDKNLVYKGFKVM
PYSTGCKTPLSNFEAGQNYKDVPDPEIMVTFPVIGDQDNAAFVAWTTTPWTLPSNLALCV
NAKFVYVKVRNKNTGKVYVVAESRLSALPADKPKANADTKKANPKAKGGAKPDSVADSYE
VLEKFNGDSLVGKKYEPLFEYFSDFSSEAFRVVADSYVTDDSGTGIVHCAPAFGEDDYRV
CLENNIIKKGENLVVAVDDDGLFTERITHFSGRYVKDADKDIIEAVKAKGRLVKTGSFVH
SYPFCWRSDTPLIYRAVPSWFVRVELLKEQLLENNKQTHWVPDYVKDKRFHNWLENARDW
AVSRSRFWGTPLPIWISDDGEEIVVMDSVEKLEKLSGVKVFDLHRHHIDHITIPSSRGPE
FGVLHRVEDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGHFVAEGLDQTRGWFYTLMV
LSTALFGKPAFRNLICNGLVLAEDGKKMSKKLRNYPPPLEVIDEYGADAVRLYIINSPVV
RAEPLRFKKEGVLGVVKDVFLPWYNAYRFLVQNAKRLEIEGSGPFVPTNLATLRSSNVLD
QWIHSATQSLVYFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEDDCHI
ALSTLYNVLLTSCKVMTPFTPFFTETLYQNLRKACEGSEESIHYCSFPEAEGTRDERIEQ
SVTRMITIIDLARNIRERHKLPLKTPLKEITVVHPDAEFLDDITGKLREYVLEELNVRSL
VPCNDTLKYASLKAEPDFSALGKRLGKSMGLVAKEVKAMSQQDILRFEEAEKVTIAGHTL
ELTDIKIVRVFKRPDGLKETEIDANGDGDVLVILDLRADDSLYEAGVAREIVNRIQKLRK
KSGLEPTDFVEVYMESLDKDVSALQQVMNSQEQYIKDTIGSSLLLSTLMPSHAVVLSEES
FQNVSKMSFKISLARPALKFNEEAIIALYSGDVKFASGLQAYLLSRDHSNLKSEFQEGNG
KITVSCIEKLPAVTVVLGDHLHLTVGDYFLSTTNS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtctgcgaaggaaaggagttctcatttccccgcgaggaagagaatgtactc
tctttctggactcaaatcgatgccttcaagactcagctcaagcgaaccgagcacctcccc
gagtacatcttctacgacgggcctcctttcgccaccggtctccctcactacggccacatc
ctcgccggtaccatcaaggacatcgtgacgcggtaccagaccatgaccggccaccacgtc
acgcgtcgattcggctgggactgccacggcctccccgtcgagaacgagatcgataagaag
ctcgatatcaagaggagggatcaggtgcttcagatggggattgataagtacaacgaagag
tgtaggagcatcgtgactcgatacgtggaggagtgggagaaggtgattactagaactggc
cgttggattgatttcaggaacgattataagacgatggatctgccctttatggagagtgtt
tggtgggtttttgctcagctttttgataagaatcttgtctacaaaggcttcaaggttatg
ccttatagtactggttgtaagacaccgttatctaatttcgaagcgggtcagaactacaag
gacgttccagatcctgagattatggtgacgttcccagtcattggtgatcaagataatgct
gcttttgtggcatggactactactccatggactcttcctagcaatcttgctttgtgtgtc
aatgccaagtttgtttatgtcaaggttcggaacaagaacactgggaaagtctacgtggtt
gctgaatctcgcttgtcagcccttcccgctgataagcccaaggctaatgcggatacaaag
aaagcaaatcctaaagccaaaggtggtgctaaacctgacagtgtggctgattcgtatgaa
gttttggagaagtttaatggagattccctggttgggaagaagtacgaacctttgtttgag
tactttagtgatttctcaagtgaggccttccgagtagtagcagatagttatgtcactgat
gacagtggtactggtattgtccactgtgctcctgcttttggtgaagacgattaccgtgtt
tgtctcgagaacaacatcattaaaaagggtgagaatctagttgtggctgttgatgacgat
gggttgttcactgagagaattacccatttcagtggccggtatgtcaaagatgcagacaag
gatataattgaagccgtgaaggccaaaggcaggcttgttaaaacggggagctttgttcac
tcatatccattttgctggcgatcagacactcctctcatatatagagccgttcccagttgg
tttgtgcgggtggagctgttgaaggaacagttgttagaaaacaataaacagacacactgg
gtacctgattatgtgaaggataaacggtttcacaattggcttgaaaacgcaagggattgg
gctgttagccgaagtagattttggggcacgcctctaccgatatggatcagtgatgatggt
gaggaaattgttgtcatggattcggtcgagaagcttgaaaagctctctggtgtcaaggtc
tttgatctacatcgtcaccatattgatcacattacaatcccatccagtcgtggtcctgag
tttggtgtgctccatcgtgtagaagatgtttttgattgttggtttgagagtgggtcaatg
ccttacgcgtacatccattatccttttgaaaacaaggagctttttgagaagaatttccct
ggtcattttgttgctgaagggcttgatcaaactcgtggatggttttatactcttatggtg
ctgtcgactgcactatttggaaagccagcatttcgaaatctgatttgcaatggccttgtg
cttgctgaggatggtaaaaagatgagtaagaaattacggaactatccacctccgttggaa
gtcatagatgagtatggagctgatgctgtgcgattgtacatcataaattctccggtcgta
cgtgctgagccactacgcttcaaaaaggaaggagtacttggtgttgtcaaagatgtattt
cttccatggtacaatgcgtatcggttccttgttcagaatgcaaagagacttgagattgag
ggctctggaccatttgttcctactaatctagcaactttacggtcatcaaacgttctcgat
caatggattcactcagctacgcagagtcttgtttattttgtccgccaggagatggatgga
tatcggctttacactgttgttccttatctcttgaagttcctcgacaatctcactaacata
tatgttagattcaaccgcaagaggctaaaaggccgcacaggagaagatgactgtcacatt
gctctttcaaccctatacaatgtgctcctcacttcttgcaaagtgatgaccccttttaca
cctttcttcactgagacgttataccagaatctgcggaaagcatgtgaaggttctgaggaa
agcattcattactgcagtttcccagaagcggaaggaacgagagatgagaggattgagcaa
agtgttacaaggatgataacaatcatcgatcttgctcggaacattcgtgagcgtcacaag
ctacccttgaaaactcctctaaaggaaatcactgtagttcatccagatgcagaattcttg
gatgacataactggaaaactaagagagtatgtcttggaagaacttaatgtaagatctcta
gtgccatgcaatgatactctgaagtatgcgtctctaaaagcagaaccagatttcagtgca
ttgggaaaacggcttggaaagtcaatgggacttgttgccaaagaagttaaagcaatgtct
cagcaagatatcttaagattcgaggaggccgagaaagttactattgctggacacacgctg
gagctaacagatatcaagattgtcagggttttcaaacgcccggatggtttgaaggaaaca
gagattgatgcaaatggagatggtgatgttttggtgattttggatctacgagcagatgat
tcgttgtatgaagcaggtgttgctcgtgagattgtgaataggatccaaaaactaaggaag
aaatcaggtctggaaccaacagactttgtggaagtgtacatggaatcattggacaaagat
gtatctgcgttgcaacaagttatgaactctcaggaacaatacataaaagatacaattggt
tcctctttgcttctgtcgacgttgatgccatcacatgcagtggtattatctgaagagagt
tttcaaaacgtttcaaagatgtcctttaagataagcttggctagaccagctttgaagttc
aatgaagaagctattattgctttgtattcaggagatgtgaaatttgcaagcgggctccaa
gcgtacttgttatcgcgggaccattctaatttgaaatcagaattccaagaaggaaatggc
aagataactgtaagctgcattgagaagctgccagcggtgactgtggtccttggagaccat
cttcatttgacagtcggggactacttcttgagcacgaccaactcttga
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