Brassica napus (rape): 111197927
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Entry
111197927 CDS
T04128
Name
(RefSeq) sphingosine kinase 1-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
bna
Brassica napus (rape)
Pathway
bna00600
Sphingolipid metabolism
bna01100
Metabolic pathways
bna04148
Efferocytosis
Module
bna_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111197927
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111197927
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
111197927
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
111197927
NCBI-ProteinID:
XP_022562754
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Position
C7:complement(48291810..48294599)
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AA seq
487 aa
AA seq
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MDPLQPENDHLPSPPLISDRVLINGVVTPLTLTAEGELQWTTETGRGKSTTEKEILSFAV
EGNKVRVKTLVESTGSSSICCGGSGGDYARKEFVFEPLYDESRKLWCDKLRQRLHSLGRP
KRLLVFVNPFGGNKTARKIFLEEVKPLFDDADVQLDVQETKYQLHAKEMVRSMDVSKYDG
IVCVSGDGVLVEVVNGLLEREDWRTALKLPIGMVPAGSGNGMIKSLLDPVGMSCSAASAT
VSIIRGHRRSLDVATISQGTTKFFSVLMLAWGLVADIDIESEKFRWMGSARFDVYGLQRI
ICLRQYNGRILFVPAPGSESCGQPASDNVEKESSVSDKTPGYQGPDTNLEDLEWREIKGP
FVSVWLHNVPWGAENTLAAPNAKFSDGFLDLIVMKDCPKLALLSLMTKLSDGTHVQSPYV
SYLKVKAFVLEPGARIDEEDKEGIIDSDGEVLARGRKSYKCDEKALMSYGKLQITVDQGL
ATLFSPE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcttcagccggagaacgaccacctcccgtctccgccgttaatctccgaccga
gttctcataaacggcgtcgtcacgccgttgactttaaccgcggagggagagcttcaatgg
acgacggaaaccggccgtgggaaatcgacgacggagaaagagatcctgagcttcgcggtg
gaaggcaacaaggttagagtgaaaaccttggtggagagcacgggatcatcatcaatctgc
tgcggaggaagtggtggagattacgcgaggaaggagttcgtgttcgagcctctctatgat
gaatctagaaagctctggtgcgataagcttcgtcaacgcctccactctctcggtcggcct
aagaggttgcttgtgtttgtgaaccctttcggtgggaataagacggcgaggaagatattt
ttggaggaagtgaagccgttgtttgatgatgctgatgttcaacttgatgttcaagaaact
aagtatcagttgcatgcaaaggagatggttaggtccatggatgtatcgaaatacgacggt
attgtttgcgttagcggcgacggtgtccttgttgaggttgtgaatggactgctcgaaaga
gaagactggagaactgccctgaaattgcctattggaatggtccctgcaggaagtggtaat
ggcatgataaaatcattgctggacccggttgggatgtcttgtagtgcagcaagtgctact
gtttccattatacgaggtcatagacgttctttagatgtggcaactatctcacaagggact
accaaattcttcagcgtcttgatgcttgcctggggattagtggctgatatagacatcgag
tcagaaaagttcagatggatgggcagtgctcgctttgatgtctatggtctccagaggata
atatgcttgagacagtacaatggacgaattctatttgtgccggctcctgggtctgaaagc
tgtggacaaccagccagtgacaatgtagagaaggagtcatctgttagtgataagacacca
ggataccaaggacctgatactaatcttgaagatctggaatggagagaaatcaaaggccca
tttgtttcagtatggcttcataatgttccctggggtgccgagaacactttggctgctccc
aacgcaaagttttctgatggcttcctggatttgattgtgatgaaagactgcccgaagctc
gccttgttatcacttatgacaaagttgagtgatgggacacatgttcaatcaccatatgta
tcgtacctaaaggttaaggcattcgtgctggagccgggtgcacggatagacgaagaagac
aaggaaggaatcatagattcagacggagaggtattggcaaggggaagaaaatcatataaa
tgtgatgaaaaggcattgatgtcttatggcaagcttcaaataacagttgatcaaggttta
gccactctcttctctcctgaatag
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