Brassica napus (rape): 111213864
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Entry
111213864 CDS
T04128
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
111213864
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
111213864
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-RING_6
NinG
Motif
Other DBs
NCBI-GeneID:
111213864
NCBI-ProteinID:
XP_048622002
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Position
C8:complement(1434853..1439379)
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AA seq
825 aa
AA seq
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MELRPRNKAIVSSDQGVNLEEDEEAYDMSSSDNDSTDSEFQVSEEDVDGNDDLPNPVPAP
VDAVPLAVFVPLPNANQSRGTKRKSTTPFIKEKGKLLWELWEKEDEKWVDQHMTEDVDLD
QHNNAVITETAEPPPDLIMPLLRYQREFLAWASKQEHSVSGGILADEMGMGKTIQAISLV
LAQRQVDRPVGCTLVLCPLVAVSQWLSEIDRFTSPGSTKVLVYHGAKREKNGNEFKKYDF
VLTTYSTVENEFRKCVMPGKRQCEYCSKWFLPNRLVTHHAYHCGPSSAKALRNPLAVMER
ERAAAEAEEASSKGKRSKKKKTKQALEEEDSVNRKKSVLYSIKWNRVILDEAHYIKERRS
NTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQISPYSYYFCKDCDCKILDYTTHA
NCHSCPHNAVRHFCWWNKNVTNPITEPAYGNEERGKRAMILLKHKVLKDILLRRTKLGRA
ADLALPPRIITLRRDALDVKESDYYESLYQNSQSQFNTYIEAGTIMINFAHIFDLLTRLR
QAVDHPYLVVYSSSGGANANLNDENKKDQECGLCHEPAEDNVVTSCEHVFCKACLIDFAA
SLGEVSCPTCSTLVTMDWTTKADIEQQANKTTIKGFRASSILNRIKLDDFQTSTKIEALR
EEIRLMVERDGSAKAIVFSQFTSFLDLINYTLGKCGVGCTQLVGSMSMAARDVAINKFRE
DPNCKVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFI
IENTVEEKILKLQKKKELVFEGTVGGSQEAIGKLTAEDMRFLFTI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgacctcgcaacaaggcgattgtttcatcggaccaaggtgtgaatctggag
gaagatgaagaagcttatgatatgtcctcttcagataatgattctaccgactctgagttt
caagtttctgaggaggatgttgatggtaatgatgatttaccaaatcctgtccctgcacct
gtggatgctgtccctcttgctgtctttgtgcctttgccaaatgcaaaccaatcaagaggc
accaaaaggaaaagcaccaccccattcatcaaagagaaaggcaagctcctgtgggagctc
tgggagaaagaggatgaaaaatgggtcgaccaacacatgacagaggatgtagacttggac
cagcacaacaacgccgtcatcaccgaaaccgccgagccgcctcctgatctcatcatgccg
ctcctaaggtaccaaagggagtttttagcatgggcgtcgaaacaagaacactcagtctca
ggaggcatactagcagacgagatggggatggggaaaaccatacaagccatctctctcgtc
ctcgcgcaacgccaagtcgacagaccagttggttgcacgcttgtgctttgtccactcgtt
gctgtctctcagtggctaagcgagatcgatcggttcacatcaccaggaagcactaaggtt
cttgtctaccacggagccaagagagagaagaacggtaacgagttcaagaagtacgacttt
gtcttgacaacatactccacggtcgagaatgagttcaggaagtgtgtgatgcctggaaag
aggcaatgcgagtactgcagcaaatggtttcttccgaacaggcttgtgacccaccatgcg
tatcactgtgggccatcttctgcgaaggcgctgagaaaccctcttgctgtaatggaaaga
gagagagcagcagccgaggctgaagaggctagtagcaaggggaagcgatctaagaagaag
aagactaaacaagctttagaggaagaagattcagtgaatagaaagaaatctgttttgtat
tctattaaatggaacagggtcattttggatgaggctcattacatcaaagagagacgtagc
aacactgcgagagctgtttttgctttggaggctacttatagatgggctttgagtgggact
ccgctccagaatcgtgttggagagctttactctctgatacgcttcctgcagattagtcca
tactcttattacttctgcaaggactgtgactgcaagattcttgattacactacgcatgca
aactgtcacagctgccctcacaatgcagtgcggcatttctgttggtggaacaagaatgtg
accaacccaataacggagcctgcttatggaaacgaggaacggggcaagagagcaatgata
ttgcttaaacacaaagttctgaaagacatcctcctaagacgtactaaactgggccgggca
gctgatcttgcgcttcctcctagaatcatcactctgaggagggatgcactagatgtaaaa
gagtctgattactatgaatcactataccaaaacagtcaatcccaattcaatacgtatatt
gaggctgggacaattatgattaactttgctcacatatttgatcttctaacccgtctgaga
caggctgttgatcatccataccttgtggtgtattccagttctggaggtgctaatgctaac
ttgaatgatgagaacaaaaaggaccaagaatgtggtctatgccatgagccagctgaggac
aatgttgtgacttcatgtgaacatgtgttctgtaaagcttgtttgattgatttcgctgca
tccctgggggaagtctcctgtccaacatgctcaacactagtgactatggactggactact
aaagctgacatagagcagcaggcaaacaagacaacaattaaaggatttagagcctcaagc
attttaaatcggattaagctggatgattttcagactagtacaaagatagaggctttgagg
gaagagataaggctcatggtcgaaagagatgggtctgccaaagcaatagttttcagccag
ttcacatcattcttggatctgataaactacacactcgggaagtgtggggttggttgcact
caactggtgggaagcatgtcaatggcagctagagatgttgctatcaacaaattcagagaa
gatccgaattgcaaagttttcttgatgagtttgaaagctggaggggttgctctcaactta
acagtcgcttcacatgtgtttatgatggatccgtggtggaacccagcggttgagaggcaa
gcacaagacagaatacataggatcgggcagtacaagccaatcagggttgtgagattcata
atagagaacacagtggaggaaaagattctgaagcttcaaaaaaagaaggaacttgttttt
gaagggaccgttggtggttctcaggaggccataggaaagttgacagcggaagatatgagg
tttctgtttaccatctaa
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