Brassica napus (rape): 125575486
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Entry
125575486 CDS
T04128
Name
(RefSeq) xanthine dehydrogenase 1-like isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00230
Purine metabolism
bna00232
Caffeine metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01232
Nucleotide metabolism
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
125575486
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
125575486
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125575486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
125575486
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
125575486
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
125575486
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
125575486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
DHODB_Fe-S_bind
Acetyltransf_18
Motif
Other DBs
NCBI-GeneID:
125575486
NCBI-ProteinID:
XP_048595076
LinkDB
All DBs
Position
A9:complement(313654..319684)
Genome browser
AA seq
1354 aa
AA seq
DB search
MGSLKKEGEMEQIGDEFTEAILYVNGVRRVLPDGLAHMTLLEYLRGLGLTGTKLGCGEGG
CGACTVMVSNYDRTSNKCIHYAVNACLAPLYSVEGMHVISIEGVGHRKHGLHPLQESLAS
SHGSQCGFCTPGFVMSMYALLRSNKTPPSEEEIEESLAGNLCRCTGYRPIVDAFRVFAKT
NDALYSGLSSLSLQDGSSICPSTGKPCSCGDGRFQPISYSDTDGAKYTEKELIFPPELLL
RKLAPLKLRGDGGMIWYRPVRLQYLLHLKAKHPEAKLLVGNTEVGIEMRLKRLQYQVLIC
VGQVPELNTVNVNDNGVEIGSALRLSELLKLFRKVVKERPAHETSACKAFIEQLKWFAGT
QIRNVASVGGNICTASPISDLNPLWMASRAEFKIINCYGDVRSVRARDFFSGYRKVDMES
NEILLSVLIPWTRPLEYVKEFKQAHRREDDIAIVNGGMRVFLEERGGELFVSEAIVAFGG
VAPVTLRARKTEEFLIGKSWSKGLLQDALKVIQSDVLIDEDAPGGMVEFRKSLVLSFFFK
FFLWVTHHLRDVKQALETFPPSYTSAVQSFARPCRAGRQDYETVRQGTAVGLPEVHLSAR
MQVTGEAEYTDDTPVPPNTLHAALVLSKMPHARIISIDDSESKSSPGFAGLFLAKDVPAD
NKIGPVVADEELFATDVVTCVGQVIGVVVADTHENAKAAAGKVEVEYEELPAILSIKEAI
ATKSFHPNTEKMLKKGDVEICFQSGQCDRIIEGEVQMGSQEHFYMEPHGSLVWTSDGGNE
VHMISSTQDPHRHQLYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAASVPSYLL
NRPVKLILDRDVDMMISGHRHSFVGKYKVGFTNEGKVLAYDLEIYNNGGNSLDLSQAVLE
IAMFNSDNVYEIPHVRIRGNVCFTNYPSNTAFRGFGGPQGMLITENWIQRIAAELDRSPE
EIKEKNFQVEGSITHYSQTLQHCTLHQLWKELKLSCNFLKARRDVDEFNSHNRWKKRGVA
MVPTKFGVSFTKTFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLS
SVFVSETSTDKVPNASPTAASLSSDMYGAAVLDACEQIKARMDPVASKLSFNSFAELASA
CYFQRIDLSAHGFYIVPDVGFDWISGKGDPFRYYTYGAAFAEVEIDTLTGDFHTRTVDIK
LDLGYSLNPAIDIGQIEGAFVQGLGWVALEEVKWGDAAHKWIKPGNLVTCGPGNYKIPSI
NDIPFNFNVSLLKGNPNSKGIHSSKAVGEPPFFLASSVLFAIKDAVKAARAEVGLGSEWF
PLDTPATPERIRMACFDEFTCPFVSSDFCPELSV
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgggttcactgaagaaggaaggagagatggagcagatcggagacgagtttacggaggcg
atactgtacgtcaatggcgttcgtagagtgttacctgatggccttgctcatatgacactt
cttgaatacctccgaggtttaggactgactgggacaaagctggggtgcggtgaaggtggt
tgtggggcttgcacggtgatggtctctaattatgacagaacatcaaacaaatgcatacac
tatgctgtcaacgcttgtttagcacctctctattccgtagaaggaatgcatgtaatatcc
attgagggagttggtcatcgcaaacacggcttgcacccacttcaggagtcattggcatct
tctcatggttcacaatgtgggttttgcactcccgggttcgtcatgtccatgtatgcgtta
ctgaggtctaataaaaccccaccttctgaagaggagatcgaagagtctctcgcaggaaac
ttatgtcgctgtactggttacagacccattgttgatgcctttcgggttttcgcaaaaact
aatgatgctctatacagtggcttatcttcacttagcctccaagacggttcaagtatttgc
ccatctactggtaaaccttgttcatgtggtgacggtagattccagcccatctcttatagt
gatacagatggggctaagtatacggagaaggagcttatcttccctcctgagcttttactg
aggaagttagctcctctgaagttgagaggagatggagggatgatatggtacagacccgtg
agacttcagtacttgctccatctcaaggcaaaacatcctgaagcaaagctactggtaggt
aacactgaggtgggaatcgaaatgaggctgaagaggttacagtatcaggtgttgatatgc
gttggtcaagtcccagaacttaacacagtgaatgttaatgacaatggtgtagagattggt
tcagctttgagactttctgagctcctgaaactattcaggaaggttgtaaaggagcgtcct
gcacatgagacatcagcttgcaaggcttttattgagcagctgaagtggtttgctgggaca
cagataagaaacgttgcttccgttggtgggaacatatgtacagctagtcctatatctgat
ctaaaccctctttggatggcttcaagagcagagttcaagataatcaactgctacggagac
gttaggtcggtacgtgcaagagatttcttcagtggctaccgtaaagtggatatggagagc
aacgagatcttgttgtcagtgttgataccgtggacgaggcctttggagtatgtgaaagag
tttaaacaggcccaccgtagagaggatgatatagctatcgtcaacggtggaatgcgtgtg
tttctcgaagagagaggtggagagctgttcgtttctgaagcaatagttgcttttggtggt
gtggctccggttactttgcgtgcaagaaagactgaggagtttctgattggaaagagttgg
agcaaaggtcttcttcaagatgcgttgaaggttatacaaagtgatgtgttaattgatgaa
gacgctcctggtggtatggtggagtttcggaagtctctagtcctaagcttcttctttaag
ttcttcttatgggttactcatcatttacgcgatgtaaagcaagctttagagactttccca
ccctcttatacgtcagctgtgcaatcgtttgctcggccatgtagagctggaagacaagac
tatgagacagtaagacaaggaacagctgttggcttgccggaagtccatctttcagcaaga
atgcaggtcacaggggaagcagaatatactgatgatactccagtgcctcctaataccttg
catgctgctttagtgctaagcaaaatgccacatgctcgcataatttctattgatgattca
gaatccaaatcttcacctggttttgctggtctgtttcttgccaaagacgttccagcagat
aataagattggacctgtggtagctgatgaagaattatttgctacagatgtggtcacatgt
gtgggacaagtcattggtgtggttgttgcggatacacatgaaaatgcaaaagctgcagca
ggaaaagttgaagttgagtatgaagagttaccagcaatattatcaatcaaggaggctatt
gctactaaaagtttccacccaaacacagagaaaatgctaaagaaaggagatgtagagata
tgctttcagtcaggtcagtgcgataggataatagaaggagaggttcaaatgggcagccag
gaacacttttacatggagcctcatggtagtttggtttggacaagtgatggagggaacgaa
gttcatatgatctcatccactcaagatcctcataggcaccagctatatgtttctcatgtt
cttggacttccaatgtctaaagtggtatgcaaaaccaaaagaattggtggtggctttggt
ggcaaggaaacgagatcagccttcatagctgctgctgcttctgttccttcctacctattg
aaccgaccagtgaaactcatactggacagagacgtggacatgatgatatctggtcaccgt
catagttttgttggaaagtacaaggttgggtttacaaatgaaggaaaagttttggcgtat
gaccttgaaatctacaacaacggtggaaactctttggatctttcccaagctgttcttgag
attgcaatgtttaactctgataatgtctatgagatcccacatgtgaggatcagaggcaac
gtttgctttactaactatcctagcaacactgctttccgaggctttggaggtccacaagga
atgcttataactgaaaactggatccagagaatcgctgctgaacttgatagaagccctgaa
gaaatcaaagagaaaaactttcaagtggaaggctctatcacacattactctcagactctt
cagcattgcacactgcatcagctctggaaggagctgaaactatcttgcaactttctaaag
gctcgtagagatgtcgacgagtttaatagccacaaccggtggaaaaagcgtggtgtggct
atggttcccacaaaatttggcgtttcatttaccaaaacgttcatgaaccaggccggtgca
cttgttcatgtgtacacagacggtactgttttggtgacacatggaggtgtagagatgggt
caaggattgcacacaaaggttgctcaagttgctgcgtctgcctttaacattccccttagt
tccgtttttgtatcagagacaagcaccgacaaggttccaaatgcgtcaccaaccgctgct
tctctgagctcagacatgtacggggctgcggttttggacgcttgtgagcagattaaagca
cgaatggaccctgttgcctctaagctcagtttcaactcctttgctgagctggcaagcgca
tgctattttcaacgaatagacctctcggctcatgggttttacattgttcccgacgttggc
tttgactggatctctggtaaaggagacccattcagatattacacctatggagctgcgttt
gcggaagttgagatcgatacgttaaccggtgactttcacacaagaacggtcgatataaag
ttggacctcggatattctcttaacccagccatagatattggacaaatagaaggagcattt
gtacaagggttaggatgggtagctctagaagaagtgaaatggggagatgcagctcataaa
tggattaaaccggggaatctagtcacttgcggacctggaaactacaagataccttccatt
aacgacattccattcaacttcaatgtttctcttctcaaggggaatccaaactcaaagggg
atacattcgtccaaagcggttggcgagcctccgtttttcctggcatcatcggttttattt
gcgattaaagatgcagtcaaagcggctcgagccgaggtgggtcttggcagcgaatggttc
cctttggacactcctgctactccagaacgtatcaggatggcttgtttcgatgagtttact
tgtccgtttgtgagttcagatttctgccctgagcttagtgtttga
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