Brassica napus (rape): 125577912
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Entry
125577912 CDS
T04128
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125577912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125577912
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125577912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
AAA_25
ORC-CDC6-like
SMC_N
AAA_5
AAA_28
AAA_23
AAA_15
AAA
NACHT
AAA_18
PduV-EutP
SRP54
AAA_33
DLIC
AAA_22
AAA_30
Zeta_toxin
Arf
AAA_14
AAA_24
AAA_16
Motif
Other DBs
NCBI-GeneID:
125577912
NCBI-ProteinID:
XP_048595990
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Position
A9:complement(13238013..13239980)
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AA seq
277 aa
AA seq
DB search
MARSDGAIRVSGMQFSYDVQDPIFFDFSLDLPAGSRCLLVGANGSGKTTLLKILAGKHMV
GGKNIVQVLNRSAFHDTDLVCSGDLSYLGGSWSKTAGSAGEIPLQGDFSAEHMIFGVEGI
DPVRREKLIDLLDINLKWRMHKVSDGQRRRVQICMGLLQPFKVLLLDEVTVDLDVVARMD
LLEFFKEECEQRGATIVYATHIFDGLETWASHLAYIHGGELKLSAKLKEIKDLETSPNLL
SVVENWLRSETKVEKKTKKKPVATSPFMSSRQMAYYR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccagaagcgacggtgcgattagggttagcggaatgcagttttcttacgacgtccaa
gatcctatcttcttcgatttcagcctcgatctccccgccggatctcgttgcctcttggtt
ggtgctaatggatctggcaagacgactttattgaagattttggctggaaagcacatggtt
ggagggaagaacattgtgcaagttctgaatcgctctgcctttcacgacacagaccttgtc
tgtagtggtgacttgtcttaccttggaggctcttggagcaaaaccgctggttccgctggt
gagattcctctccagggagatttctcagcagagcatatgatatttggagttgaagggatt
gatcctgtgagaagagagaaactaattgatcttcttgatatcaatcttaagtggcgtatg
cataaggtttctgatgggcagagacgtcgagtgcagatatgcatgggtcttttacaacca
ttcaaggtattattactggacgaggtcactgtggacctagacgttgttgcgaggatggat
ttgttggaattcttcaaagaagaatgtgaacagagaggagctacaattgtatatgcaacg
catattttcgacggactagagacatgggctagtcatttggcctatatccatggaggagag
ctgaaactctctgctaaactgaaggagatcaaggatttagaaacgtccccaaatttgctc
tctgtggttgaaaattggcttcggtctgaaaccaaagtggagaagaagactaagaagaaa
cctgttgctacgtctccatttatgtcatctagacaaatggcgtattaccgatga
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