Brassica napus (rape): 125578610
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Entry
125578610 CDS
T04128
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125578610
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125578610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
125578610
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125578610
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
125578610
NCBI-ProteinID:
XP_048597828
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Position
A9:complement(43120026..43123040)
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AA seq
491 aa
AA seq
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MPLFELFRLSKAAQDNNTSPPVDEVVELVWENGQVSTQSRSKNIPPPHQGASSRPREIGN
SSKTTVMDEIPMSVPSLMTGLSQDDDFVPWINHHHQSLDGYCSEFLQEEEMALFQRRNNG
NEPAPPPPAAASSSQYNGFQSHSLYGTDRAREPLVTTSNKPGLINFSHFLRPATLGKSPN
NNADRSKEKSPQSPPKVFQTKVLGAKEVLNESVASAMPKDSQKACLVSEDSGRKEQESEK
AVVCSSVGSGNSLDGPSESPSLSVKRKHSDVQDIDCHSEDVEGESGDGRKEAAPSRTGTG
SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI
MSMASGYYMPPVMFPPGMGHYPAAAAAMAMGMGMPYAMGLPDMSRAGPSVNHGPQFQVPG
MQQPVGMAIPRVSGGGFFTGSSSTMEMNKSDNGSTRDLSGGTKDETMTENNNGLRPIKRK
QTSSDQFCGSS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttgagcttttcaggctctccaaagctgctcaagacaataacacttctcca
cctgtagatgaagttgttgagcttgtgtgggagaacggtcaggtttcaactcaaagcaga
tcaaagaacattcctccaccacatcaaggagcctcttctaggcctagagagatcggaaac
agctcaaagaccacggtgatggacgagatccctatgtcagtaccttctctgatgacgggt
ttgagtcaagacgatgactttgtcccatggatcaatcatcatcatcaatccttagatgga
tactgctctgagttcttacaagaggaggagatggcgttgtttcagagaagaaacaatggc
aatgaaccagctcctcctcctcctgctgctgcttcttcttctcagtacaacggttttcaa
tcacattctctctatggaactgatagagctagagaaccgttagtcaccacaagtaacaag
cctggtttgatcaacttttcgcacttcttgcgccctgcaactttggggaagagtcctaat
aacaacgctgataggtctaaagagaagagtcctcaaagcccgcctaaagtgtttcagacc
aaagtacttggagctaaagaggttctcaacgagtctgttgcctctgctatgcctaaggat
agccaaaaggcttgcctagtttcagaagactctggtagaaaggagcaggagagtgagaag
gctgttgtgtgttcttctgttgggtctggtaatagtcttgatgggccgtctgaaagtcct
tcgctttctgttaaaagaaagcattctgatgttcaggatattgactgtcatagtgaagat
gttgaaggagaatcaggagatggaagaaaagaagcagctccatcaagaacagggactggt
tcaaagagaagtcggtcggctgaagtacataatctgtctgaaaggagacggcgtgatagg
attaacgagaagatgcgtgctcttcaagaactcataccaaactgcaacaaggtggacaaa
gcttcaatgctagatgaagcaatcgaatatctcaagtcacttcaacttcaagtacagatc
atgtcaatggcttctggttactacatgccaccggtcatgttcccaccgggtatgggccat
tacccggctgctgctgctgcaatggcaatgggtatgggaatgccttatgcaatgggctta
cctgatatgagccgtgccggtccctcggttaaccacggaccacagttccaggtcccgggg
atgcaacaaccagtggggatggcgattccacgtgtttctggtggtggtttcttcacgggt
tcttcttcaacgatggagatgaataagagtgacaatggttcgactagagacttatcaggt
ggtacaaaagatgaaacgatgacagagaacaacaatggcttgagacctataaagagaaaa
cagacgtcttctgatcagttttgtggatcgtcgtga
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