Brassica napus (rape): 125586914
Help
Entry
125586914 CDS
T04128
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
bna
Brassica napus (rape)
Pathway
bna00280
Valine, leucine and isoleucine degradation
bna00650
Butanoate metabolism
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125586914
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125586914
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125586914
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125586914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
SpaA
Motif
Other DBs
NCBI-GeneID:
125586914
NCBI-ProteinID:
XP_048612748
LinkDB
All DBs
Position
A2:16297772..16300917
Genome browser
AA seq
461 aa
AA seq
DB search
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA
VTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG
TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK
LRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSIND
ADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEK
VSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSG
STATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFV
TTKEGILDLLAPGTYYLKEVDSLYRRFYGKKGDDGSITNGH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacgtagggatattggctatggacatctatttccctcccacctgtgttcaa
caggaagctttggaagctcatgatggagcaagcaaagggaaatacaccattggacttggt
caagattgtttagctttttgcactgagcttgaagatgttatctcaatgagtttcaatgcg
gtgacatctcttcttgaaaagtacaagattgaccccaagcaaattgggcgtcttgaagta
ggcagtgagactgtcattgacaagagcaagtccatcaaaaccttcttgatgcaactcttt
gagaaatgtggaaacactgatgtagaaggtgttgactcgaccaatgcttgttatggtgga
actgcagctttgctaaactgtgtcaattgggttgagagtaactcctgggatggacgctat
ggccttgtcatttgtactgacagtgcggtttatgcagaaggacccgcaaggcccactgga
ggagcagctgccattgctatgttgataggaccagatgctcctattgtttttgagagcaaa
ttgagaggaagccacatggctcatgtctatgacttttacaagccaaatcttgctagcgag
tacccggttgttgatggtaagctttcacagacatgctaccttatggcacttgactcttgc
tataaacatttatgcaacaagtttgagaaacttgagggcaaagagttctccatcaatgat
gctgattactttgtcttccattctccatacaacaaacttgtgcagaaaagctttgctcgt
ctcttgtacaacgacttcttgagaaacgcaagctccattgatgaggctgccaaagaaaag
ttcactccttattcctccttgtccctcgatgagagttaccaaagccgtgatcttgaaaag
gtgtcacaacaactagcaaaaacgtattatgatgctaaagtgcaaccaacgactttagta
ccaaaacaagtcggtaacatgtacactgcttctctctacgcagcattcgcttccctcgtc
cacaacaaacacagcgatttggcgggaaagcgggtggttatgttctcatatggaagtggt
tcaaccgcaacaatgttctcattgcgtctctgcgagaaccagtctcctttcagcttatca
aacatcgcttctgtaatggatgttggcggtaaattgaaggctagacatgagtatgcacct
gagaagtttgtggagacaatgaagctaatggaacataggtacggagcaaaggagtttgtg
acgaccaaggaaggtatcttagaccttttggctccggggacttattatctgaaagaggtt
gattcattgtaccggagattctatggcaagaaaggagacgatggatccataaccaatgga
cactga
DBGET
integrated database retrieval system
