Brevundimonas naejangsanensis: DA69_02810
Help
Entry
DA69_02810 CDS
T04375
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bne
Brevundimonas naejangsanensis
Pathway
bne03030
DNA replication
bne03410
Base excision repair
bne03420
Nucleotide excision repair
bne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DA69_02810
03410 Base excision repair
DA69_02810
03420 Nucleotide excision repair
DA69_02810
03430 Mismatch repair
DA69_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bne03032
]
DA69_02810
03400 DNA repair and recombination proteins [BR:
bne03400
]
DA69_02810
Enzymes [BR:
bne01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DA69_02810
DNA replication proteins [BR:
bne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DA69_02810
DNA repair and recombination proteins [BR:
bne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DA69_02810
NER (nucleotide excision repair)
GGR (global genome repair) factors
DA69_02810
MMR (mismatch excision repair)
DNA ligase
DA69_02810
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DA69_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
DNA_ligase_ZBD
HHH_2
PTCB-BRCT
Nlig-Ia
DZR_2
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ANF53775
UniProt:
A0A172Y3V1
LinkDB
All DBs
Position
complement(580217..582538)
Genome browser
AA seq
773 aa
AA seq
DB search
MLQTPVHTLTREEAREELAWLSDELARHEALYYGEDAPEISDADYDVLKRRSLDIVAQFP
TLTFTVSPNRRVGAPVSTQFAEVRHGVPMLSLDNAFDEGEVRDFAARIARFLKLPGEEPI
AFVAEPKIDGLSASLRYEKGVLVQGATRGDGKTGEDVTANLRTIAAIPQTLAGSGWPDVI
EIRGEVYAPNAAFDAFNAAAEAEGKRTYANPRNFAAGSLRQKDPKITAQRPLTFFAYAWG
ETSAPFAETQHSALEAFRSWGFQVNDRSARVEGAEGLIGVYQTLEADRSRLGYDIDGVVY
KVDRLDWQQRLGFIARSPRWAIAHKFPAQQATTVLEGIDIQVGRTGSLTPVARLHPVTVG
GVVVRNATLHNEDEIARKDVRIGDTVVLQRAGDVIPQIVGVVETLRPDGAVPYVFPTTCP
VCGSEAVREGDEVKRRCTGGLICDAQIVERLKHFVSRRAFDIEGLGEKQLIAFHARGWIK
EPADIFRLARDEQKLALLRAEDGYGETSVGNLMAGIDARRVISLDRLIFGLGVREIGEQT
SLVLARAFGSWTAFQGACMAAANGLASDDWKTLAATHAISPRVLTLMAEARPAADDPWPE
APMDQKIALAFPGMAAPARRSLAEISDGWSDLTRWAAVARNEGPSEILNQIAGVSGVGPV
AAEALAHFFHEPHNLQVVDALLAELERVEDVAAPTTDSPVAGKTVVFTGSLERFTRDEAK
ARAESLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVAVLTEDEWLALIGG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaacaccagttcacaccttgacgcgcgaggaagcccgtgaagagctggcatgg
ctatcagacgaactcgcgcgtcacgaggcgctctactatggcgaagatgcgccggagatt
tccgacgctgactacgacgttctcaaacgacgttcgcttgatatagtcgcgcaattcccg
accctcacattcacagtctctcccaacagacgcgtcggcgcccccgtctcgacccagttc
gccgaggtccgccacggcgtgcccatgctgtcgctggacaacgccttcgacgagggcgag
gtgcgcgacttcgcagcccgcatcgcccgcttcctgaagctgcccggcgaggagcccatc
gccttcgtcgccgagcccaagatcgacggcctctccgccagcctgcgctatgaaaagggc
gtcctggtccagggcgccacgcgcggcgacggcaagacgggcgaggacgtgaccgccaat
ctgcgcaccatcgccgccattccccagaccctggccggctcaggctggcccgacgtcatc
gagatccgcggcgaggtctacgcccccaacgccgccttcgacgccttcaacgcggcggcc
gaggccgaaggcaagcgcacctacgccaacccgcgcaacttcgccgccgggtcgctgcgc
cagaaggacccgaagatcacggcccagcgccccctgaccttcttcgcctacgcctggggc
gagacctccgcccccttcgccgagacgcaacacagcgcgctggaggccttccgcagctgg
ggctttcaggtcaacgaccgctcggcccgcgtcgagggcgccgaaggcctgatcggcgtc
tatcagacgctggaggccgaccgcagccgcctcggctacgacatcgacggcgtggtctat
aaggtcgaccggctggactggcagcagcgcctcggcttcatcgctcgcagcccccgctgg
gccatcgcccacaaattcccggcccagcaggcgacgaccgtgctggaaggcatcgacatc
caggtcggccgcaccggctccctgacccccgtcgcgcgcctgcaccctgtcaccgtcggc
ggcgtcgtggtccgcaacgccaccctgcacaacgaggacgagatcgcccgcaaggacgtc
cgcatcggcgacaccgtcgtcctgcaacgcgccggcgacgtcatcccccagatcgtcggc
gtggtcgaaaccctgcgtcccgacggcgccgtcccttacgtcttccccaccacctgcccc
gtctgcggttccgaagccgtgcgcgagggtgacgaggtcaagcgccgctgcaccggcggc
ctgatctgcgacgcccagatcgtcgagcgcctcaagcacttcgtcagccgccgcgccttc
gacattgaaggccttggcgaaaagcagctgatcgccttccacgcgcgcggctggatcaag
gagcccgccgacatcttccgcctcgcccgcgacgagcagaagctggccctgctgcgcgcc
gaagacggctatggcgagaccagcgtcggcaacctgatggccgggatcgacgcgcgccgc
gtcatcagcctcgaccgcctgatcttcggcctgggcgtgcgagagatcggcgaacagacc
tcgctcgtcctggcccgcgccttcggcagctggaccgccttccagggggcctgcatggcc
gccgcgaacggcctcgccagcgacgactggaagacgttggcggcgacccacgccatttcg
ccgcgcgtcctgacgctgatggccgaagcccgacccgccgccgacgatccgtggccggaa
gcgcccatggatcagaagatcgccctcgccttccccggcatggccgcgcccgcccgccgc
tcgctggcggaaatctcggacggctggagcgacctcacccgctgggccgccgtcgcgcgc
aacgaaggcccatccgaaattctgaaccagatcgccggcgtctccggcgtcggcccggtc
gccgccgaggccctggcacacttcttccacgagccgcacaacctccaggtcgtcgacgcc
ctgctggccgagctcgagcgcgtcgaggacgtggccgcccccacgaccgacagcccggtg
gcgggcaagaccgtggtcttcaccggctcgctggaacgcttcacccgcgacgaggccaag
gcccgcgccgaaagcctcggggcgaaggtctcgggctcggtgtcgaagaagaccgactac
gtcgtcgccggccccggcgcggggtccaagctgaaggacgccgaaaaacacggcgtcgcc
gtcctgaccgaggacgagtggctggcgctgatcggcggctga
DBGET
integrated database retrieval system