KEGG   Brevundimonas naejangsanensis: DA69_02810
Entry
DA69_02810        CDS       T04375                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bne  Brevundimonas naejangsanensis
Pathway
bne03030  DNA replication
bne03410  Base excision repair
bne03420  Nucleotide excision repair
bne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DA69_02810
   03410 Base excision repair
    DA69_02810
   03420 Nucleotide excision repair
    DA69_02810
   03430 Mismatch repair
    DA69_02810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bne03032]
    DA69_02810
   03400 DNA repair and recombination proteins [BR:bne03400]
    DA69_02810
Enzymes [BR:bne01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DA69_02810
DNA replication proteins [BR:bne03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DA69_02810
DNA repair and recombination proteins [BR:bne03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DA69_02810
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DA69_02810
   MMR (mismatch excision repair)
    DNA ligase
     DA69_02810
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DA69_02810
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 PTCB-BRCT Nlig-Ia DZR_2 Zn_ribbon_NUD
Other DBs
NCBI-ProteinID: ANF53775
UniProt: A0A172Y3V1
LinkDB
Position
complement(580217..582538)
AA seq 773 aa
MLQTPVHTLTREEAREELAWLSDELARHEALYYGEDAPEISDADYDVLKRRSLDIVAQFP
TLTFTVSPNRRVGAPVSTQFAEVRHGVPMLSLDNAFDEGEVRDFAARIARFLKLPGEEPI
AFVAEPKIDGLSASLRYEKGVLVQGATRGDGKTGEDVTANLRTIAAIPQTLAGSGWPDVI
EIRGEVYAPNAAFDAFNAAAEAEGKRTYANPRNFAAGSLRQKDPKITAQRPLTFFAYAWG
ETSAPFAETQHSALEAFRSWGFQVNDRSARVEGAEGLIGVYQTLEADRSRLGYDIDGVVY
KVDRLDWQQRLGFIARSPRWAIAHKFPAQQATTVLEGIDIQVGRTGSLTPVARLHPVTVG
GVVVRNATLHNEDEIARKDVRIGDTVVLQRAGDVIPQIVGVVETLRPDGAVPYVFPTTCP
VCGSEAVREGDEVKRRCTGGLICDAQIVERLKHFVSRRAFDIEGLGEKQLIAFHARGWIK
EPADIFRLARDEQKLALLRAEDGYGETSVGNLMAGIDARRVISLDRLIFGLGVREIGEQT
SLVLARAFGSWTAFQGACMAAANGLASDDWKTLAATHAISPRVLTLMAEARPAADDPWPE
APMDQKIALAFPGMAAPARRSLAEISDGWSDLTRWAAVARNEGPSEILNQIAGVSGVGPV
AAEALAHFFHEPHNLQVVDALLAELERVEDVAAPTTDSPVAGKTVVFTGSLERFTRDEAK
ARAESLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVAVLTEDEWLALIGG
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgctccaaacaccagttcacaccttgacgcgcgaggaagcccgtgaagagctggcatgg
ctatcagacgaactcgcgcgtcacgaggcgctctactatggcgaagatgcgccggagatt
tccgacgctgactacgacgttctcaaacgacgttcgcttgatatagtcgcgcaattcccg
accctcacattcacagtctctcccaacagacgcgtcggcgcccccgtctcgacccagttc
gccgaggtccgccacggcgtgcccatgctgtcgctggacaacgccttcgacgagggcgag
gtgcgcgacttcgcagcccgcatcgcccgcttcctgaagctgcccggcgaggagcccatc
gccttcgtcgccgagcccaagatcgacggcctctccgccagcctgcgctatgaaaagggc
gtcctggtccagggcgccacgcgcggcgacggcaagacgggcgaggacgtgaccgccaat
ctgcgcaccatcgccgccattccccagaccctggccggctcaggctggcccgacgtcatc
gagatccgcggcgaggtctacgcccccaacgccgccttcgacgccttcaacgcggcggcc
gaggccgaaggcaagcgcacctacgccaacccgcgcaacttcgccgccgggtcgctgcgc
cagaaggacccgaagatcacggcccagcgccccctgaccttcttcgcctacgcctggggc
gagacctccgcccccttcgccgagacgcaacacagcgcgctggaggccttccgcagctgg
ggctttcaggtcaacgaccgctcggcccgcgtcgagggcgccgaaggcctgatcggcgtc
tatcagacgctggaggccgaccgcagccgcctcggctacgacatcgacggcgtggtctat
aaggtcgaccggctggactggcagcagcgcctcggcttcatcgctcgcagcccccgctgg
gccatcgcccacaaattcccggcccagcaggcgacgaccgtgctggaaggcatcgacatc
caggtcggccgcaccggctccctgacccccgtcgcgcgcctgcaccctgtcaccgtcggc
ggcgtcgtggtccgcaacgccaccctgcacaacgaggacgagatcgcccgcaaggacgtc
cgcatcggcgacaccgtcgtcctgcaacgcgccggcgacgtcatcccccagatcgtcggc
gtggtcgaaaccctgcgtcccgacggcgccgtcccttacgtcttccccaccacctgcccc
gtctgcggttccgaagccgtgcgcgagggtgacgaggtcaagcgccgctgcaccggcggc
ctgatctgcgacgcccagatcgtcgagcgcctcaagcacttcgtcagccgccgcgccttc
gacattgaaggccttggcgaaaagcagctgatcgccttccacgcgcgcggctggatcaag
gagcccgccgacatcttccgcctcgcccgcgacgagcagaagctggccctgctgcgcgcc
gaagacggctatggcgagaccagcgtcggcaacctgatggccgggatcgacgcgcgccgc
gtcatcagcctcgaccgcctgatcttcggcctgggcgtgcgagagatcggcgaacagacc
tcgctcgtcctggcccgcgccttcggcagctggaccgccttccagggggcctgcatggcc
gccgcgaacggcctcgccagcgacgactggaagacgttggcggcgacccacgccatttcg
ccgcgcgtcctgacgctgatggccgaagcccgacccgccgccgacgatccgtggccggaa
gcgcccatggatcagaagatcgccctcgccttccccggcatggccgcgcccgcccgccgc
tcgctggcggaaatctcggacggctggagcgacctcacccgctgggccgccgtcgcgcgc
aacgaaggcccatccgaaattctgaaccagatcgccggcgtctccggcgtcggcccggtc
gccgccgaggccctggcacacttcttccacgagccgcacaacctccaggtcgtcgacgcc
ctgctggccgagctcgagcgcgtcgaggacgtggccgcccccacgaccgacagcccggtg
gcgggcaagaccgtggtcttcaccggctcgctggaacgcttcacccgcgacgaggccaag
gcccgcgccgaaagcctcggggcgaaggtctcgggctcggtgtcgaagaagaccgactac
gtcgtcgccggccccggcgcggggtccaagctgaaggacgccgaaaaacacggcgtcgcc
gtcctgaccgaggacgagtggctggcgctgatcggcggctga

DBGET integrated database retrieval system