Bombiscardovia nodaiensis: KIM372_16120
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Entry
KIM372_16120 CDS
T09715
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bnk
Bombiscardovia nodaiensis
Pathway
bnk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KIM372_16120 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnk03400
]
KIM372_16120 (nth)
Enzymes [BR:
bnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KIM372_16120 (nth)
DNA repair and recombination proteins [BR:
bnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KIM372_16120 (nth)
Prokaryotic type
KIM372_16120 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDR53705
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All DBs
Position
2041455..2042276
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AA seq
273 aa
AA seq
DB search
MTASASSTASANASGKQRRRSASSAATSESRAHRLRRIHEEYDILCQEFPDAVCALHFTN
PFELLVATVLSAQTTDKRVNSVTPELFEHFPSPEHMASASASAVESIIHSVGFYHAKATH
IIGLSQMLVEDYDSQVPADINELVKLPGVGRKTANVVLGNAFGIPGFPVDTHVTRVTARL
RWRTDWRSTHPDPVKIEHEICGYFPPEDWTNLSHRLIFHGRVTCHSRKPDCAHCPLAASC
PSAELFLGAPVEADQVPVFRNGHLEGEPEGEKR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcagcaagcagtacagcatccgctaacgccagcggcaaacagcgacgcagg
tcagccagctcagcagccaccagcgagagccgggcccaccgtctgcggcgtatacacgag
gagtacgacatcctctgccaggagtttcctgacgcggtctgcgccctccatttcaccaac
ccgtttgagctcctcgtcgccacagtgctgagcgctcaaacgacagacaagcgtgtcaat
tcggtgactcccgagctcttcgagcactttccttcacctgagcacatggcctcggccagc
gccagcgcagtggagagcatcatccactcggttgggttctaccacgctaaagccacccat
attattggcctgtcgcagatgctggtggaggactacgacagccaagtgccagcggacatc
aacgagctcgtcaaactgccaggagtcggtcgcaaaacagccaatgtggtcttgggcaac
gctttcggcatccctggtttcccggtagacacgcacgtcacccgcgtcaccgcccgcctg
cgctggcggacagactggcgctccacccaccccgatccagtcaaaattgagcacgaaatc
tgcggctacttcccgcctgaggattggacgaacctctcccaccggctcatcttccacggc
cgcgtcacctgccactcccgcaagcctgactgcgcccactgccccctggccgcaagctgc
ccgagcgccgaactcttcttgggagcgccggtcgaagctgaccaagttccggtcttccgc
aacggccatctcgaaggtgagccagagggcgaaaagcgctga
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