Brettanomyces nanus: FOA43_000487
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Entry
FOA43_000487 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_000487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000487
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FOA43_000487
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Ortholog
Paralog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_24
AAA_29
SMC_N
AAA
AAA_15
ATP-synt_ab
RsgA_GTPase
AAA_23
VapE-like_dom
AAA_14
AAA_22
Rad17
AAA_28
AAA_25
AAA_18
AAA_16
AAA_33
Arf
MMR_HSR1
AAA_7
nSTAND3
Zeta_toxin
AAA_27
AAA_30
Motif
Other DBs
NCBI-GeneID:
62193888
NCBI-ProteinID:
XP_038776746
UniProt:
A0A875RVV9
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Position
1:complement(1039912..1040856)
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AA seq
314 aa
AA seq
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MTEVPSIYTKNLFYRYPNSRIGLFDINITLKRGSRMLLVGPNGAGKSTLLKILAGQRLIN
DGIVLLNGKDPFDMVDRGSQIVTYLGTEWANNEITKRDIPVTVLVESVGGNFYKQRREML
INMLDIDITWRMNQCSDGERRRVQLCMGLLKPWDLLLLDEVTVDLDVLVRYRLLEFLKKE
TEQRNCTIVYATHIFDGLGEWPTQVVHLNGGIIVKKYRPEDIDFINGAERPVEETELKED
AKMERQERRSHVVINKIKSFYPLALKWLNEDLHVRGERTDDNTKPKYEELTQRLVKFYYD
DQDRISKYFERTQQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttccctcaatttacacaaagaacttattttataggtatccgaattctcga
atcggactatttgacattaatataaccttgaagagagggtctaggatgcttcttgtgggt
cctaatggtgcgggcaaatctactctactcaagattttggcgggtcaacgtttgatcaat
gacggtatagttttgctaaacggtaaggatcccttcgacatggttgacagaggcagccag
attgtcacatatttgggtactgaatgggcaaataacgagatcactaaaagagatattccg
gtgacagtgttggttgaatccgtaggtggtaacttctacaaacaaaggcgagagatgctt
atcaatatgttggatattgacatcacttggaggatgaatcaatgctcggacggtgagcgt
agacgtgtacaactatgcatgggactattgaagccttgggatttgctattgttggacgag
gtcactgtggacttagatgttttggtcagatacaggctacttgaatttcttaaaaaagaa
actgagcaaagaaactgtactatagtttatgctacccacatttttgatggcttgggagag
tggcctactcaagttgttcacttgaatggtggaattattgttaagaagtaccgtccagag
gatattgactttatcaatggcgccgaaagacctgttgaggaaacagaattgaaggaagat
gcaaagatggaaagacaggagagaagatctcatgtcgttataaataaaatcaagagtttc
tacccacttgcgttaaaatggttgaacgaggatttgcatgtcagaggagagagaactgat
gataatactaagcccaagtatgaagaattgacccagaggttggtcaaattttattatgat
gatcaagatcggatcagcaagtactttgaaaggactcagcagtga
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