KEGG   Brettanomyces nanus: FOA43_000487
Entry
FOA43_000487      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
bnn  Brettanomyces nanus
Pathway
bnn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FOA43_000487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_000487
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     FOA43_000487
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_24 AAA_29 SMC_N AAA AAA_15 ATP-synt_ab RsgA_GTPase AAA_23 VapE-like_dom AAA_14 AAA_22 Rad17 AAA_28 AAA_25 AAA_18 AAA_16 AAA_33 Arf MMR_HSR1 AAA_7 nSTAND3 Zeta_toxin AAA_27 AAA_30
Other DBs
NCBI-GeneID: 62193888
NCBI-ProteinID: XP_038776746
UniProt: A0A875RVV9
LinkDB
Position
1:complement(1039912..1040856)
AA seq 314 aa
MTEVPSIYTKNLFYRYPNSRIGLFDINITLKRGSRMLLVGPNGAGKSTLLKILAGQRLIN
DGIVLLNGKDPFDMVDRGSQIVTYLGTEWANNEITKRDIPVTVLVESVGGNFYKQRREML
INMLDIDITWRMNQCSDGERRRVQLCMGLLKPWDLLLLDEVTVDLDVLVRYRLLEFLKKE
TEQRNCTIVYATHIFDGLGEWPTQVVHLNGGIIVKKYRPEDIDFINGAERPVEETELKED
AKMERQERRSHVVINKIKSFYPLALKWLNEDLHVRGERTDDNTKPKYEELTQRLVKFYYD
DQDRISKYFERTQQ
NT seq 945 nt   +upstreamnt  +downstreamnt
atgactgaagttccctcaatttacacaaagaacttattttataggtatccgaattctcga
atcggactatttgacattaatataaccttgaagagagggtctaggatgcttcttgtgggt
cctaatggtgcgggcaaatctactctactcaagattttggcgggtcaacgtttgatcaat
gacggtatagttttgctaaacggtaaggatcccttcgacatggttgacagaggcagccag
attgtcacatatttgggtactgaatgggcaaataacgagatcactaaaagagatattccg
gtgacagtgttggttgaatccgtaggtggtaacttctacaaacaaaggcgagagatgctt
atcaatatgttggatattgacatcacttggaggatgaatcaatgctcggacggtgagcgt
agacgtgtacaactatgcatgggactattgaagccttgggatttgctattgttggacgag
gtcactgtggacttagatgttttggtcagatacaggctacttgaatttcttaaaaaagaa
actgagcaaagaaactgtactatagtttatgctacccacatttttgatggcttgggagag
tggcctactcaagttgttcacttgaatggtggaattattgttaagaagtaccgtccagag
gatattgactttatcaatggcgccgaaagacctgttgaggaaacagaattgaaggaagat
gcaaagatggaaagacaggagagaagatctcatgtcgttataaataaaatcaagagtttc
tacccacttgcgttaaaatggttgaacgaggatttgcatgtcagaggagagagaactgat
gataatactaagcccaagtatgaagaattgacccagaggttggtcaaattttattatgat
gatcaagatcggatcagcaagtactttgaaaggactcagcagtga

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