Candidatus Bandiella numerosa: N3Z17_05315
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Entry
N3Z17_05315 CDS
T09014
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bnu
Candidatus Bandiella numerosa
Pathway
bnu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N3Z17_05315 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnu03400
]
N3Z17_05315 (nth)
Enzymes [BR:
bnu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N3Z17_05315 (nth)
DNA repair and recombination proteins [BR:
bnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N3Z17_05315 (nth)
Prokaryotic type
N3Z17_05315 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF2400
HHH_5
Ogg-HhH
NifQ
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WHA04642
LinkDB
All DBs
Position
complement(1115937..1116566)
Genome browser
AA seq
209 aa
AA seq
DB search
MLRKNVDEIFDRLSKQRPSPKIELEYKNNFTLFVAVVLSAQSTDKGVNKVTPALFQIADD
PYKMLMLGEGGLKDHIKSIGLYNSKAKNIINACQIMVDEYNSQLPDNFEDLRKLPGVGRK
SANVLLNSLFNEPTIAVDTHVFRVSNRLGLCKTKTPDATEFALNKKILVRWKKYAHHWLV
LHGRYICKARKPICGECVIYDLCKFKDKN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaaagaatgtagatgaaatttttgataggctaagcaaacaacgaccaagtcca
aaaattgaattagaatacaaaaataattttacattgttcgttgcagtagttctctcagct
caatcaactgataagggagttaataaagtaactccggcattatttcagatcgcagatgat
ccgtataaaatgcttatgttaggggagggggggctaaaggatcatataaaaagcattggg
ctttataattcgaaagcaaaaaatattataaatgcttgccaaattatggttgatgagtat
aatagccaacttccagataattttgaagacctccgcaagttaccaggtgtaggtaggaag
agtgctaatgtgctactcaattcgctctttaatgaaccaaccatagctgttgatacacat
gtttttagagtgagcaatcgcttaggtttatgtaaaactaaaactccagatgccacagaa
tttgcactaaataaaaaaatattggttaggtggaaaaaatatgcacaccattggttagtt
ttgcatggcagatacatttgtaaagcaagaaaaccaatatgtggggagtgtgttatatat
gatttatgtaaatttaaagataaaaattaa
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