Brassica oleracea (wild cabbage): 106300497
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Entry
106300497 CDS
T04124
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106300497
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106300497
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106300497
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
106300497
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106300497
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106300497
Prokaryotic type
Other AARSs
106300497
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
106300497
NCBI-ProteinID:
XP_013592106
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All DBs
Position
C6:complement(<6416283..6420977)
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AA seq
1166 aa
AA seq
DB search
MEEVGEGKDFSFPREEEKVLSFWNQIDAFKTQLKRTEHLPEFIFYDGPPFATGLPHYGHI
LASTLKDIVTRYQTMTGHHVTRRFGWDCHGLPIETEIEKKLGITRRAQVVEMGIDKYNEE
CRSVVTTFVEGWEEVITRSGRWIDFKEDYKTMDLNFMESVWWVFAQLFDKNLVYKGFKVM
PFSTGLKTPLSNSEAKYKCKEVSDPDAMVTFPVIGDEDNAAFVAWTTTPWNLPCNLALCV
NAKFVYLKVRNKHNGSVYIVAESRLSALPANADTKKAKAKGGAAADSYEVLDTFDGASLV
GKKYEPLFDYFSDFSSVAFRVVADNYVKDDSGTGIVHLAPAFGDDDYRVCLDNNIIEKGE
GLVVAVDEDGLFTERITHFFGRYVRDAEKDVIEAVKAKGRLVKTGSFTHKNPFCYRTDTP
LINRAGPAWFVRVDEQLKEQLLKNNDQTYWVPDHVKDNRFRNWLEDARDWCISRSRFWGT
PLPIWISDDGEEVVVMDSVDKLEKLSGVKVFDLHRHHIDQITIPSCRGPEFGVLRRVEDV
FDCWFESGSMPYAYIHYPFENKELFEKNFPGDFVAEGIDQTRGWFYHLLLLSTALFGKPA
FRNLICNGIVLDENGKKMSKSEKNYPPPTEVIDEYGADSVRLYLINSPIVRAESLRFRKE
GVIGVVKNVFLPWYNAYRFLVQNAKRLEIDGSGPFVPTDVATLRSSNVLDQWIHSATQSL
VCFVRQEMDGYRLYNVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEDDCHIALSTLYNVLL
TSCKVMTPFTPFFTETLYQNLRKACEGSEESIHYCSFPEADKTRVERRIEQSVTRMMTVT
DLARNIRERHKLPLKTPLKEITVVHPDAEFLDDITGKLREYVLEELNVRSLVTCNDTLKY
ASLKAEPDFSVLGKRLGKSMGLVAKEVREMSQQDILRFEEAGKVTIAGHTLELTDIKIVR
VFKRPDGLKETEIDANGDGDVLVLLDLRPDDSLYEAGVAREIVNRVQKLRKKSGLEPTDF
VEVYIESLDKDVSALRQVLNSQEQYIKDTIGSSLLLSTLMPSHAVILSEESFQNVSKLSF
KISLARPALKFNEEAIIVLYSGDVKFASGLQAYLLSRDHSNLKSEFQEGNGKITVSCIEK
LPVVTVVLGDHLHLTVGDYLLSTTNS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtgggagaaggtaaggatttctcgttccctcgagaggaagagaaagtcctg
tcattctggaatcagatcgatgcgttcaagacgcagctgaaacgaacggagcatctcccg
gagttcatcttctacgacgggcctcctttcgccaccggtcttcctcactacggtcacatc
ctcgccagtacccttaaggacatcgtaactcgctaccagacgatgaccggccaccacgtc
acgcgtcgcttcgggtgggactgtcacggcctccccatcgagaccgagattgaaaagaag
ctcggtattacgaggagagcccaagtggttgagatggggattgataaatataacgaagag
tgtaggagcgttgtgactacctttgtggaagggtgggaggaggttattactagaagtggg
cgttggattgatttcaaggaggactacaagaccatggatctcaactttatggagagtgtt
tggtgggtttttgctcagctttttgataagaatcttgtctacaaaggcttcaaggttatg
ccttttagtactggtctcaagacaccactatctaattccgaagctaagtacaagtgcaag
gaagtttcggatcctgatgctatggtgacgttccctgttattggcgatgaagataacgct
gcttttgtggcgtggactactactccatggaatcttccttgcaatcttgctttgtgtgtc
aatgccaagtttgtttatctcaaggttcgtaacaagcacaatgggagtgtctacatcgtt
gctgaatctcgcctttcagctcttcccgctaatgctgataccaagaaagccaaagccaaa
ggtggtgctgcggctgattcttatgaagttttggacacatttgatggagcttctctggtt
gggaagaagtacgagcctctgtttgactacttcagtgatttctcaagcgtggcctttcga
gttgtagcagataattatgtcaaggatgacagtggtactggcatcgtccacttggctccc
gcctttggtgatgatgactaccgtgtttgtcttgacaacaacatcattgaaaagggtgag
ggtctagtcgtggctgttgatgaagatgggttgtttactgagagaattacccatttcttt
ggccggtatgtcagagatgcagagaaagatgtaattgaagccgtgaaggccaaaggcaga
cttgttaaaactgggagctttactcacaaaaatccattttgctatcgaacagacactcct
ctcataaatagagccggtcccgcttggtttgtgcgggtggacgagcagttgaaggaacag
ttgttaaaaaacaatgatcagacatactgggtacctgatcatgtgaaggataatcgcttt
cgcaattggcttgaagacgcaagggattggtgcattagccgaagtagattttggggaacg
cctctaccaatatggatcagtgatgatggtgaggaagttgttgtcatggattctgtcgac
aagcttgagaagctctccggtgtcaaggtctttgatctacatcgtcaccatattgatcaa
attacaatcccatcttgtcgtgggcctgagtttggtgtgctccgtcgtgtagaagacgtt
tttgattgttggtttgagagtgggtcaatgccttacgcgtacatccattatccttttgaa
aacaaggagctttttgagaagaacttccctggtgattttgtggctgaagggattgatcaa
actcgtggatggttttatcatcttttgttgctgtcgactgcactatttggaaagccagca
tttcgaaatctgatttgcaatggtattgtgcttgatgagaatggaaaaaagatgagtaag
agtgaaaagaattatccacctcctacggaagtcatagatgagtatggagctgattctgtg
cgattgtacctcataaactctccaatcgtacgcgctgagtcactacgcttcagaaaggaa
ggagtaattggtgttgtcaaaaatgtatttcttccatggtacaatgcatacagattcctt
gttcagaatgcaaagagacttgagattgacggttctggaccgtttgttcctactgatgta
gcaactttacggtcatcaaacgttctcgatcagtggattcactcagctacccagagtctt
gtttgttttgtccgccaggagatggatggttaccggctttataatgttgttccttatctt
ttgaagttcctcgacaatctcactaacatatatgttagattcaaccgcaagaggttaaaa
ggccgtacaggagaagatgattgtcacattgctctttcaactctatacaatgtgctcctc
acttcttgcaaagtgatgaccccttttacacctttcttcactgagacgttataccagaat
ctgcggaaagcatgtgaaggttctgaggaaagcatccattactgcagttttccggaagcg
gacaaaacgagagtggagaggaggattgagcaaagtgttacaaggatgatgacagtcact
gatcttgctcggaacattcgtgagcgtcacaagctacccttgaaaactcctctaaaggaa
atcactgtagttcatccagatgcagaattcttggatgacatcactggaaaactaagagag
tatgtcttggaagaacttaatgtaagatctcttgtgacatgcaatgatactctgaagtat
gcgtcactaaaagcagaaccagatttcagtgtattgggaaaacggcttgggaagtcaatg
gggctcgtggcaaaagaagttagagaaatgtctcagcaagatatcttaagattcgaggag
gccggaaaagtgactattgctggacacacgctggagctaacagatatcaagattgtcagg
gttttcaaacgcccggatggtttgaaagagacggagattgatgcaaatggagatggtgat
gttttggtgcttttggatctacgacctgatgattcgttgtatgaagcaggtgttgctcgt
gagattgtcaatagggtccaaaaactaaggaagaagtcaggtctggaaccaacagacttc
gtggaagtttacattgaatcattggacaaagatgtatctgcgttgcgacaagttctgaac
tctcaggaacaatacataaaggatacaattggttcctctttgcttctgtcgacgttgatg
ccatcacatgcagtgatattatctgaagagagttttcaaaatgtttcaaagctgtccttt
aagataagcttggctagaccagctttgaagttcaatgaagaagctattattgtcttgtat
tcaggagatgtgaaatttgcaagcgggctccaagcgtacttgttatctcgggaccattct
aatttgaaatcagaattccaagaaggaaatggcaagataactgtaagctgcattgagaag
ctgccagtggtgactgtggtccttggagaccatcttcatttgacagtcggggactacttg
ttgagcacgaccaactcttga
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