Brassica oleracea (wild cabbage): 106307202
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Entry
106307202 CDS
T04124
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
boe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106307202
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
106307202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106307202
Transcription factors [BR:
boe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106307202
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
106307202
NCBI-ProteinID:
XP_013599535
UniProt:
A0A0D3DYB3
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Position
C8:complement(39612677..39615765)
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AA seq
491 aa
AA seq
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MPLFELFRLSKAAQDNNTSPPVDEVVELVWENGQVSTQSRSKNIPPPHQGTSSRPREIGN
ASKTTVMDEIPMPVPSLMMGLSQDDDFVPWLNHHHQSLDGYCSDFLQEEDMALFQRRNNG
NESAPPPPAAASSSQYNGFQSHSLYGTDRAREPLVTTSNKPGLINFSHFLRPATLGKSTN
NNADRSKEKSPQSPPKVFQTKVLGAKEVLNDSVASAMAKDSQKACLVSEDSGRKEQESEK
AVVCSSVGSGNSLDGPSESPSLSVKRKHSDVQDIDCHSEDVEGESGDGRKEAAPSRTGTG
SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI
MSMASGYYMPPVMFPPGMGHYPAAAAAMAMGMGMPYAMGLPDMSRAGPSVNHGPQFQVQG
MQQPVGMAIPRVSGGGFFTGSSSTMEMNKSDNGSTRDLSGGTKDETTTENNNGLRPIKRK
QTSSDQFCGSS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttgagcttttcaggctctccaaagctgctcaagacaataacacttctcca
cctgtagatgaagttgttgagcttgtttgggagaacggtcaggtttcaactcaaagcaga
tcaaagaacattcctccaccacatcaaggaacctcttctaggcctagagagatcggaaac
gcctcaaagacgacggtgatggacgagatccctatgccagtaccttctctgatgatgggt
ttgagtcaagacgatgactttgtcccatggctgaatcatcatcatcaatccttagatgga
tactgctctgacttcttacaagaggaggacatggcgttgtttcagagaagaaacaatggc
aatgaatcagctcctcctcctcctgctgctgcttcttcctctcagtataacggctttcaa
tcacattctctctatggaactgatagagctagagaaccgttagtaaccacaagcaacaag
cctggtttgatcaacttttcgcacttcttgcgacctgccactttggggaagagtactaat
aacaacgctgatagatctaaagagaagagtcctcaaagcccacctaaagtgtttcagacc
aaagttcttggagctaaagaggttctcaacgattctgttgcctctgctatggctaaggat
agccaaaaggcttgcctagtttcagaagattccggtagaaaagagcaggagagtgagaag
gctgttgtgtgttcttctgttgggtctggtaatagtcttgatggtccatctgaaagtcct
tcgctttctgttaaaagaaagcattcggatgttcaagatattgactgtcatagtgaagat
gttgaaggagaatcaggagatggaagaaaagaagcagctccatcaagaacaggcactggt
tcaaagagaagcaggtcggcggaagtacataatctgtctgaaaggagacggcgtgatagg
attaacgagaagatgcgtgctcttcaagaactcataccaaactgcaacaaggtggacaaa
gcttcaatgctagatgaagcaatcgaatatctcaagtcacttcaacttcaagtacagatc
atgtcaatggcttctggttactacatgccaccggttatgttcccaccgggtatgggccat
tacccggctgctgcagcagcaatggcaatgggtatgggaatgccttatgcaatgggctta
cctgatatgagccgtgccggtccctcggttaaccacggaccacagttccaggtgcagggg
atgcaacaaccagtggggatggcgattccacgtgtttctggtggtggtttcttcacgggt
tcttcttcaacgatggagatgaataagagtgacaatggttcgactagagacttatcaggt
ggtacaaaagatgaaacgacgacagagaacaacaatggcttgagacctataaagagaaaa
cagacgtcttctgatcagttttgtggatcgtcgtga
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